Thermodesulfobacterium sp. TA1: F1847_04950
Help
Entry
F1847_04950 CDS
T06202
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet02020
Two-component system
thet02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F1847_04950
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F1847_04950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thet03021
]
F1847_04950
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thet02035
]
F1847_04950
Transcription machinery [BR:
thet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F1847_04950
Bacterial motility proteins [BR:
thet02035
]
Flagellar system
Flagellar assembly proteins
Stator
F1847_04950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
GerE
SieB
PhyR_sigma-like
UPF0122
Arc_C
HTH_69
DUF4315
HTH_38
CLZ
DHR-2_Lobe_A
HTH_37
NPV_P10
P22_Tail-4
Phage_antitermQ
Tweety
Motif
Other DBs
NCBI-ProteinID:
QER42124
LinkDB
All DBs
Position
complement(964513..965262)
Genome browser
AA seq
249 aa
AA seq
DB search
MVPKIINKILYQKPPLEKVIEEFLPTINYWANRYAFQGQPVISKEDLVSVGVIGLIEAYH
RYDPTKKVKFRTFAEFRIKGAMLDEIRKIDIIPRSIRDKIDELENKVKDLYKNLGRMPEE
GEIAQAMNLSLEEYHKFLEHIKGITFIDIQSFKQKMPDLEEEDIFEFIGDTKEDPFEKYS
LKELQEGLEKALEYLTEKERLVLALYYYEGLTMKEIAKVLECTESRVSQLHNQAIIKLRS
ILNQPKTGG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggtccctaaaatcatcaataaaatactttatcaaaaaccccctttagaaaaggtaata
gaggagtttttgcctactattaactactgggctaatagatatgcttttcaaggacagcca
gtaataagcaaagaagatttggtatctgtaggagttataggcttgatagaggcttatcat
cgttatgatccaactaagaaagtaaagtttaggacttttgctgaatttagaattaaaggg
gctatgcttgatgaaattcgaaaaatagatataataccaagaagtataagagataaaata
gatgaattagaaaataaagtaaaagatttatataaaaatttaggaagaatgccagaagaa
ggagaaatcgcccaggctatgaaccttagtttagaggaatatcacaagtttttagaacac
ataaagggcattactttcatagacattcaaagttttaaacaaaagatgccagacttagaa
gaagaagatatttttgaatttataggagatactaaggaagatccttttgaaaagtattct
ctcaaagagcttcaagaggggcttgaaaaggctttagaataccttaccgaaaaggagcgt
ttggttttagccctttattattatgaagggttaacgatgaaagaaatcgccaaggtttta
gagtgtacagaaagtagagtttcccaacttcacaaccaagctataattaaacttagaagt
attttaaaccaacctaaaacaggaggttaa
DBGET
integrated database retrieval system
