Thermodesulfobacterium sp. TA1: F1847_05300
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Entry
F1847_05300 CDS
T06202
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F1847_05300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thet03021
]
F1847_05300
Transcription machinery [BR:
thet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F1847_05300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r1_1
DUF7167
Motif
Other DBs
NCBI-ProteinID:
QER42189
LinkDB
All DBs
Position
complement(1037127..1038470)
Genome browser
AA seq
447 aa
AA seq
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MAQKDLNEKILELGKTGQLTYEILNKILPEEYNDPDKMEEIFDLLESYGIELKELDPYER
EEYIEKKVHDKIKELSTFVEGELTEEETISEPGSEELLSLYLKEMGKYELLTPEREEELS
REIREGFDNILKLIKETWIDCKEIIDLKAVVQEWQRRDPNLKPKKTYVNYLEKLVKELEE
KYVKGQKNKVSIQGIKEFCADIKKNINRIEKAKDEMVKANLRLVVSIAKKYVRQGLSLAD
LIQEGNLGLMRAVYRFDYRKGNKFSTYASWWIRQSITRAILDKTRTIRLPVHFLELRNYV
FKVFYELSKELGREPTPEELSQRTGVPYEKILVIFETSKEPVSLETPIGDEDSTLGNFIE
NKKSPSPYDTARKRDISDKIKRFLATLSPREEKIIRMRFGLGEYEGYTLEEIGYMFKVSR
ERIRQIEKKALYKMRQLAQKEKFDIRD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaaggatcttaacgaaaagattttagagttaggaaaaacaggtcagcttact
tatgagattttaaacaaaattttacctgaagagtataacgaccctgacaagatggaggaa
atttttgaccttcttgagagctatgggatagaactaaaggaattagatccttatgaacga
gaagagtatatagaaaaaaaggttcatgataagatcaaagaactttcaacgtttgttgaa
ggagaattaaccgaagaagagactatttcagagcctgggtcagaggagcttttgtctctg
tatctcaaagaaatgggtaagtatgagcttttaacccctgaaagagaagaagaactgtca
agagagataagagaaggatttgataatattttaaaattgataaaagaaacatggatcgat
tgtaaggaaattatagacttaaaagcagtagttcaagaatggcaaagaagagaccctaat
cttaaacctaaaaagacttatgttaactatctggaaaaattggttaaagagttagaagaa
aaatacgttaaaggtcaaaaaaacaaggtaagcattcaaggaataaaagaattttgtgct
gatataaaaaagaacatcaaccggatagaaaaagccaaagatgaaatggtaaaggctaat
cttaggttggtagtttctatcgctaaaaaatatgtaaggcagggattatctttagcagac
cttatccaagagggaaaccttggtttgatgagggctgtataccggtttgattatagaaaa
ggtaataagtttagcacctatgcttcttggtggataaggcagtcgattaccagagcgatt
cttgataaaacaagaaccataagacttccggtgcactttttagaactaagaaactatgta
tttaaggttttttacgaactttctaaagaattgggaagagagcctaccccagaagagctg
tcccaaagaaccggcgttccttatgaaaaaatcttggttatctttgaaacctcaaaagag
cctgtatctttggagacccctataggggatgaagatagcactcttgggaattttatagag
aataaaaaaagcccttccccttatgatacagcaagaaaaagagatatttcagacaagata
aagagatttctggctaccctttctcctagggaagaaaaaatcatccgtatgaggtttgga
cttggagaatacgaaggttataccttagaagagataggttatatgtttaaggtctcaaga
gaaagaataagacagatagagaaaaaagccctttataagatgagacaacttgctcaaaag
gaaaaatttgatattagagactaa
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