Thermodesulfobacterium sp. TA1: F1847_05915
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Entry
F1847_05915 CDS
T06202
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1847_05915 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thet03019
]
F1847_05915 (rny)
Messenger RNA biogenesis [BR:
thet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F1847_05915 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
HHH_5
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
QER42299
UniProt:
A0A5P1UZC5
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Position
complement(1158360..1159964)
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AA seq
534 aa
AA seq
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MGLLLGLVLGLILGVVAVFVYFYLQRKRSLLVQKTAEEIIKEAENKAKEVLDRAETEAKL
KLQQAELKVKEQLLVHKQRLEEEFNKRLQEVILKEERIAGKEEYLSKKENDLFKREEQLL
KREENLEKKLRDIEELKKTLEEQKNEVERIYQQAKEELEKLAGLSEKEAKEILLKRVDEE
LIEEKAKLIMKIENEIKEEAKRKSQELLSYSVAKAAIPFVTEKTVSTVQLPNEEMKGRII
GREGRNIRTFETLTGVDLLIDDTPEVVVLSCVDPLRREIARLALERLIADGRIHPTRIEE
VVKQVEEEMEQHLIEIGEKACFELGVYGLHLELVKMLGKLKYRTSYSQNVLQHSIETAII
CGALAGELGIDVKKAKRAALLHDIGKAASYELEGPHALIGAEIARKYGEDEEIVNAIASH
HEDIPISSLLGILLQIADAISGARPGARRELLEAYIKRIKELESIAYSFEGVEKAFAIQA
GREIRVIVDDKKITDEQAYVLAREIAQKIEKEVTYPGIIRVTVIRETRVIEYAK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttttgttaggtttagttttagggttgatcttaggtgtggttgctgtttttgtt
tatttctatcttcaaagaaaaagaagtcttttggttcaaaagaccgcagaagaaatcatc
aaagaggcagaaaacaaggctaaagaagttttagatagagctgaaactgaggccaaatta
aagcttcaacaggcagagctcaaagttaaagaacagcttttagttcacaaacaaagatta
gaagaagagtttaataaaaggcttcaagaagtgatcttaaaagaagaaaggattgcaggt
aaagaagaatacctttctaaaaaagaaaatgacctttttaaaagagaagaacagctttta
aaaagagaagaaaatttagaaaaaaagctaagagatattgaagaactcaagaaaacatta
gaagaacaaaaaaatgaagtagaaagaatttaccagcaggcaaaagaagaacttgaaaaa
ttagctggactttctgagaaagaggctaaagagattttacttaaaagggttgatgaggag
ttgatagaggaaaaggcaaaattaattatgaaaatagaaaatgaaatcaaggaagaggct
aaaagaaaaagccaagagcttctttcctattcagtggctaaagctgctattccttttgta
actgaaaagacagtttctaccgtccaacttcctaatgaggaaatgaagggtagaattata
ggaagagaagggagaaacattcgtacttttgagaccttaacaggggttgatcttttaata
gacgatacacctgaggtggtggtgctttcttgtgtagacccactgaggagagaaatagca
cgtttagctttagaaaggttgatagcagacggaaggatccatcctaccagaatagaagag
gtggttaaacaggtagaagaagagatggaacaacatcttatagaaataggtgaaaaagct
tgctttgagttaggggtttatggtcttcatcttgagttggtaaaaatgttaggtaaactt
aaatatagaacaagctacagccaaaacgtacttcagcattctatagaaacagccattatt
tgtggtgctttagcaggagaattaggtatagatgttaaaaaagccaaaagggctgcttta
ctacatgacatcggtaaggctgcttcctatgagttagaaggtcctcatgctttaataggg
gctgaaatcgcaagaaaatatggggaagatgaagaaatagtgaatgctatagcctctcac
catgaagatattccaataagcagccttttaggcatccttttacagatagctgatgctatt
tcaggtgcaagacctggtgctagaagagaacttttagaagcttacataaagagaataaag
gaattagaatctatagcctactcttttgaaggggttgaaaaagcctttgccatacaggca
ggtagagaaataagggtaatcgtagatgataaaaagattacagacgaacaggcttatgta
ttggccagagaaattgctcaaaaaatcgaaaaagaggtgacttatccgggtatcattagg
gttactgtaataagagaaaccagagtgatagaatacgcaaaataa
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