Thermodesulfobacterium sp. TA1: F1847_06040
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Entry
F1847_06040 CDS
T06202
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet03030
DNA replication
thet03430
Mismatch repair
thet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F1847_06040 (dnaX)
03430 Mismatch repair
F1847_06040 (dnaX)
03440 Homologous recombination
F1847_06040 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thet03032
]
F1847_06040 (dnaX)
03400 DNA repair and recombination proteins [BR:
thet03400
]
F1847_06040 (dnaX)
Enzymes [BR:
thet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F1847_06040 (dnaX)
DNA replication proteins [BR:
thet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F1847_06040 (dnaX)
DNA repair and recombination proteins [BR:
thet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F1847_06040 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RCF1-5-like_lid
AAA_30
RuvB_N
AAA_16
AAA_5
ResIII
TIP49
AAA_14
AAA_assoc_2
AAA_18
TIP49_C
SLFN-g3_helicase
Mg_chelatase
nSTAND3
Rad17
PIF1
AAA_19
Rep_fac_C
TsaE
Glyco_tranf_2_5
DNA_pol3_delta_C
Thymidylate_kin
Cdc6_lid
Torsin
NPHP3_N
T2SSF
Motif
Other DBs
NCBI-ProteinID:
QER42323
UniProt:
A0A5P1V1S8
LinkDB
All DBs
Position
complement(1178214..1179728)
Genome browser
AA seq
504 aa
AA seq
DB search
MSYIVLARRYRPQSFKEVVGQTHVVKTIANALKLGKLSHALLFSGIKGTGKTTVARLVAK
ALNCLNPIEGYEPCNQCPNCLEINRGVFVDVIEIDAASNRGIDQIREIIENLKYAPTRGK
AKVYIIDEAHMLTKEASNALLKSLEEPPSHVYFILATTEPNRLLPTILSRCQRYDFRKLD
LPQLIKHLKTVCEKESYQIEEEALKLIAKEAQGSLRDALSLLDQAMAYGTHTKEDVIQAF
GWHEALLIEELAQVLLEKNLKKTLEVVQKVYEQGTDLIYLMEKLTEFFRELFLTKALPQE
NTQHFQNPVLRDLVLEYELEEIFLILQSLTRDLEILRRSSYPQLQFELALVRVCEQAKLV
PLNKLIEKIETLPNLSFDYKNLEPSLKETEEKKEPLTFSEKTWQDFLELLAKDRPILYSL
ANSLPSPVFNLQRLHIKVKEHLKNTTYFDELIEKMKEFFKKPVEVEVEVSPQPKLEEIKE
RPEVKEILTHLSAKISYIQILNKE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatatagttttagccagaagatatagacctcagtcgtttaaagaagtagtagga
cagacccatgtagtcaaaaccatagccaatgcccttaaattaggtaagctttctcatgcc
cttttgttttcaggtataaaaggaacaggtaaaaccacggtagcaaggcttgtagctaag
gctttaaactgcctaaatccgatagaaggatatgaaccctgtaatcaatgtcctaactgc
ttagagattaatcgtggggtttttgtagacgttatagaaatagatgctgcttcaaaccga
ggaatagaccaaataagagagatcatcgaaaaccttaaatatgctcctactcgaggtaaa
gccaaggtttatatcatagacgaagcccatatgcttactaaagaggcttcaaacgccctt
cttaaatccttagaagagccaccttctcatgtatattttattttagctactaccgagcct
aacaggcttttacctaccatcctttctaggtgccagcgttatgattttagaaagcttgac
cttcctcaattaataaagcatctaaaaaccgtttgtgaaaaggagagttatcagatagaa
gaggaggccttaaaacttatcgctaaagaagctcaagggagtttaagagacgccctttca
cttttagaccaggctatggcttatggaactcataccaaagaggatgtcattcaagccttt
ggatggcatgaagccttgttaatagaggaattagctcaagttttgttggagaaaaaccta
aaaaaaaccttagaggttgttcaaaaggtttacgaacaaggaaccgaccttatctatctt
atggaaaaactaaccgaatttttcagagagcttttcttgacaaaagctctacctcaagaa
aatacccagcattttcaaaatccagttcttagagatttagtcttagaatacgaattagag
gaaatttttctgatcttacagagcttaaccagagaccttgagatattaagaagaagtagt
tatcctcagctgcagtttgaattagccttggtaagggtttgcgaacaagctaaattagtt
cctctaaacaaattgatagagaaaatagagactttacctaacctttcttttgactataaa
aaccttgaaccttcacttaaagaaactgaagaaaaaaaagaacctttaactttttctgaa
aaaacttggcaagattttttagaactacttgcaaaagaccgtccaattctttacagtctc
gctaatagtttaccctcacctgtctttaatttacagcgtttacatataaaagttaaggaa
catttaaaaaatactacatattttgatgaacttatagagaagatgaaagagttttttaag
aagcctgtagaggttgaggtagaggtttctcctcaacctaagcttgaagagataaaagaa
aggcctgaggtaaaagaaattttaacccatctttctgctaaaatatcttatattcaaata
ttaaacaaggagtaa
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