Thermodesulfobacterium sp. TA1: F1847_06920
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Entry
F1847_06920 CDS
T06202
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
thet
Thermodesulfobacterium sp. TA1
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thet01002
]
F1847_06920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thet01011
]
F1847_06920
Peptidases and inhibitors [BR:
thet01002
]
Cysteine peptidases
Family C40
F1847_06920
Peptidoglycan biosynthesis and degradation proteins [BR:
thet01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
F1847_06920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
NMB0315_dom_I
LysM_OapA
LysM_RLK
LysM3_NFP
HTH_28
LRAT
Amidase_5
TEBP_OB2-like
DUF2149
Motif
Other DBs
NCBI-ProteinID:
QER42489
UniProt:
A0A5P1UZW5
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All DBs
Position
1354580..1356112
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AA seq
510 aa
AA seq
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MFKNFYNFKNFKSQLKDLHLIVWLFFCIFLLMTYQVEAKTKTKPKKTLVNTKTYNKQTIY
TVKKGDTLFSIAKKFGLSVEELKQTNHLKSNNLKPGQILKIVVSQPPSKVRNLTTKAPSI
KQNLNSEPLIYVVQKGDTLFSIAKRFGVSVEELKNLNQLSENSLKVGQTLKIGNPSETTK
MISLKDERSQSLSSNSKDDVLIQSQPIETTKIKWITYKVQKGDTLFSIAKKFGISVEELK
RINNLRYSKLSVGQVLKIKETKVVVQEKVNLPKLKQTFSSDFVWHKVKEGETLYNISLRY
AIPIEDIKKLNNLEDNVIFVGQDLKIPTYGNEPPFVLENPAMAFQEKEKSYSFSDLFLNK
SFLDQEDEKLLKDKFMAIAQQYEEYRYKLGGNGNGYMDCSMFVKKVFENLGLTLPRTSRE
QFMVGIPVPKEELIPGDLVFFVRNHRSERISHVGIYIGNNRFIHFSSTKKGLAIDSLDSN
YFKTRFVGAKRVLKSSILFNLTSFPEDIGS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaacttctataacttcaaaaacttcaaaagtcaattaaaagaccttcattta
atagtttggctgtttttttgtatttttcttttgatgacctatcaggttgaggctaagact
aaaaccaaacctaaaaaaaccttagttaataccaaaacctataacaaacaaacgatttat
acggttaaaaaaggtgataccctctttagtatcgccaaaaaatttggattatcggtagaa
gaattaaaacagaccaatcacttaaaaagtaataatttaaaacctgggcaaattttaaag
attgtcgtatctcaaccaccttctaaagttagaaatttaaccacaaaagccccttctatt
aagcaaaatttaaattcagaacctttgatttatgtagttcaaaagggggatacccttttc
agtattgctaaaagatttggggtatctgtagaagaacttaaaaacttaaaccaactctct
gaaaattctttaaaggtgggacaaactttaaaaatcggtaacccttcagaaacaactaaa
atgatttctttgaaagatgaaaggtctcaatccttaagtagtaactctaaggatgatgtt
ttaatccaatctcagcctatagaaactacaaagataaaatggataacttataaagttcaa
aaaggggataccctttttagtattgctaaaaagtttggtatttcggtagaagaattaaaa
cgtataaacaatcttagatattctaaattaagcgtagggcaggtgctaaaaatcaaagaa
actaaagttgttgttcaagagaaagtgaacttgcctaagttgaaacagactttttcttct
gattttgtctggcacaaggtaaaagaaggtgaaactttatacaacatatctttaagatat
gctatccctatagaagatatcaaaaaactaaacaaccttgaggataatgtaatttttgta
ggccaggatttaaaaatcccaacctatggaaatgaaccaccttttgtgttagaaaatcct
gctatggcctttcaagaaaaagaaaaatcttacagcttttctgatttatttttaaacaaa
tcgttcttagaccaagaagatgaaaaattattaaaagataaatttatggcgatagctcaa
caatacgaagagtatcgttataaattaggaggaaacggcaacggatatatggactgttcg
atgtttgtgaaaaaggtatttgaaaatttagggctaactttaccaaggacttcaagagag
caatttatggtaggtattcctgtgcctaaagaagagcttattccaggagatttagtgttt
tttgttagaaatcatagatctgaaaggattagccatgtaggtatttatattggaaacaat
cgctttattcatttttcttcaactaagaaaggattggctatagattccttagatagtaat
tattttaaaacccgatttgtaggagctaaaagggtgcttaaaagttctatcttattcaac
cttacttcttttcctgaagatatcggctcttaa
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