Thermodesulfobacterium sp. TA1: F1847_09010
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Entry
F1847_09010 CDS
T06202
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
thet
Thermodesulfobacterium sp. TA1
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thet03032
]
F1847_09010 (topA)
03400 DNA repair and recombination proteins [BR:
thet03400
]
F1847_09010 (topA)
Enzymes [BR:
thet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F1847_09010 (topA)
DNA replication proteins [BR:
thet03032
]
Prokaryotic type
DNA Topoisomerases
F1847_09010 (topA)
DNA repair and recombination proteins [BR:
thet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1847_09010 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
WH_AprA
Motif
Other DBs
NCBI-ProteinID:
QER42872
UniProt:
A0A5P1V351
LinkDB
All DBs
Position
complement(1792818..1794470)
Genome browser
AA seq
550 aa
AA seq
DB search
MAKKLFIVESPTKIKTLQKVLSSKDFIFRATFGHIKDLPSKSLGVDLNTFQPSFYYLSSK
KKVLEELKKLALKVEEVYLATDPDREGEAISFHLYEYLKSIKENLIFKRVDLIEITELGI
KQALRSVRSLDTGLYLAYQTRRVLDRLIGYLLSPKLSKALKLPLSAGRVQSPALRLIVER
EEEIESFVPETSFSLRVKVQDNKDRVYELELWFKKGLYKDKDKKSLEEFFAKHLAGQSII
LNKITEKRLVKQPPYPLKTTTLIEVAGSSLGFSPKETMILAQGLYEKGLITYMRTDSVRV
SPLAKKAVKDFILKTFGKEYLGKERRVKTSKFEQGAHECIRPTNLFKDPAFLTSREKALY
ELIKVFFIASQMRGAEFLELSYVFGQDLLPKGWFLFTKRKVLVFDGFLRVLKDESSYENP
LDLKEGEKLQVLSFEIKEHKTKPPERYTPHSLVKKLESLGIGRPSTYATILDILFKRNYI
KKEGKHLKPTELGRLVCQTLLDGAPVFMDYKYTAEMEGKLDFVAKGEATYEDLVKKTYGL
IKNCRFSPNL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaactttttatcgtcgaatctcctactaagataaagaccttacaaaaagtc
ctatcctcaaaagattttatctttagagcaacttttggtcatattaaagatcttccctca
aaaagcttaggggttgacctaaacacctttcagccttctttttattatcttagttctaaa
aaaaaggtgctggaagaacttaaaaaattggctttaaaagtagaagaggtttacttagct
actgatccagacagagaaggagaagccataagttttcatctgtatgaatatctcaagtct
atcaaagaaaatctgattttcaaaagagttgatttgatagagattactgaacttgggatt
aaacaagcactgcgttcggtaagaagccttgatacagggctttatcttgcctatcaaacc
cgaagggttttagaccgactgataggctatcttctctctccaaaactttctaaggctctt
aaactacctctttctgcaggaagggtgcaaagccctgctttaaggcttatcgtagaaaga
gaagaagagatagaaagttttgttccagaaacgagcttttctttgagggttaaggtccaa
gacaataaagacagggtatacgaacttgagctctggtttaaaaagggattgtataaagat
aaagacaaaaaaagcttagaggaattttttgctaagcatctagctgggcaaagcattatc
ttaaacaaaattactgaaaagaggttggttaaacagcctccttatcccttaaaaactact
actcttattgaagtggctggaagttccttaggctttagccctaaagaaaccatgattctt
gcccaagggctttatgaaaaagggcttattacctatatgcgtaccgattccgtaagggtt
agccctcttgcgaaaaaggctgttaaagattttatacttaaaacctttgggaaggaatat
cttgggaaagaaagaagggttaaaacctctaagtttgagcaaggagcccatgaatgtata
agaccaaccaatctttttaaggaccctgcgtttttaacctcaagagaaaaagccctttac
gaacttataaaagtcttctttattgcaagtcagatgcgtggggcggaatttttagagtta
agctatgtgtttggccaagaccttttgcctaaggggtggtttttgtttaccaaacgcaag
gtgcttgtttttgatggctttttaagggttctaaaagatgagagttcctatgaaaacccg
cttgatttaaaggaaggcgagaaactccaagtgctttcttttgagataaaggagcataag
accaaacctccagagcgttatacccctcacagtctggttaaaaaacttgaaagtttagga
attggtaggccatcaacctatgcaaccattttggacattctttttaaacggaattatata
aaaaaggaagggaaacacctaaaaccaaccgaattaggtaggttggtatgccaaaccctt
ttagatggggctccggtttttatggactataaatataccgctgaaatggagggaaagctt
gactttgtggctaaaggtgaggcaacttacgaggatttggtaaaaaaaacctatggttta
atcaaaaattgccgtttttcgcccaatctttaa
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