Thermoleptolyngbya sichuanensis: HPC62_00820
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Entry
HPC62_00820 CDS
T06607
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
theu
Thermoleptolyngbya sichuanensis
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
theu03016
]
HPC62_00820
Enzymes [BR:
theu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HPC62_00820
Transfer RNA biogenesis [BR:
theu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HPC62_00820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
WHD_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QKD80904
UniProt:
A0A6M8B2E2
LinkDB
All DBs
Position
complement(181351..183393)
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AA seq
680 aa
AA seq
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MDKGTLVEFRPSSEGGAGATRPRRLAVVDRPEGKKLWVVIDERGQAHTLHPRDITYTVAN
QTYKPSEISAFLKEVQPYLDPDSLEVAWELLIEDGETVDPAGMARLLFSDDSPPLQYAAH
CLLSDDRLYFKQKGDRYEPRPAAQVKELKHQLSVTLQRQQEWEGFLARLRQVLAGESLEW
AAGDRPWLEALERFATLGEEASHRTPALEVLSALGRPETPEEAFQLLVDLRLWHPHENLF
LRRSQIPIQFPSRVLEVAQRCLIDPPADSSRDRLDLTHLKVYTIDDESTREIDDGLSVEF
LPDGQHRIWVHIADPSRWLTPGDALDLEARRRCITLYLPTGMTPMFPPELATGPMSLVQG
QLCHAFSFGVLVDADGAIQSYEMHPTLIKPTYRLTYDDVDEMLQLGIQAEPELEILFQTA
SQRQRWRMQQGAISIQMPESSIKVTEDDEIRIDVFEESASRILVSEMMILAGEVAGRYGE
AHGLPLPFRGQEQPELPPEEELMLLPPGPVRGCAVRRCMKRSEMGVTPIRHAGLGLDVYV
QVTSPIRRYADLLAHFQIKAHLQGDPLPFSPEEMTELLQGIGSTTYEMVQVERQTNRYWS
LEYLRRNANEVWPALVLRWLREHENFGLVLLEDLGLEMAMRFSRTVEVGDRLDVKVSYVD
PRRDLIQFVEIDQAVPQAAS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggacaagggaacattagttgaatttcggccgagcagcgagggcggagcgggggctact
cgtccgcgtcgcttggctgtggtcgatcgcccggagggaaaaaagctgtgggtggtgatc
gatgaacgaggccaggctcatacgctgcatccccgcgacatcacttacaccgttgcgaat
caaacctataagccgtctgaaattagcgcctttctgaaagaggtgcagccctaccttgat
cccgacagcctggaagtggcgtgggaattgctgatagaggatggggaaacggttgaccca
gcgggaatggcgcggctgctgttttccgatgacagcccccccttgcagtatgctgcccac
tgtctgctgtcggacgatcgcctctatttcaagcagaagggcgatcgctacgagccgcgt
cccgcagcgcaggtaaaggaactcaagcatcagctttcggtcacgctccagcggcagcag
gagtgggaaggttttttggcaagattgcgccaggttttggcgggcgaatcgctggaatgg
gcagcgggcgatcgcccctggctagaagccttggagcggtttgctacgctaggagaagaa
gccagccaccgtaccccggcgctggaggttttatcggcgctgggtcgtcctgaaacaccg
gaagaagcctttcagcttttggtggatctgcggctctggcatcctcacgagaatttgttt
ctgcggcgcagccagattccgatccagttccctagccgagtccttgaagtggcccaacgc
tgtcttattgacccgcccgccgactctagccgcgatcgcctagacctgactcacctcaag
gtctataccattgacgacgaaagcacgcgggaaatcgacgatggtctgagcgtcgagttt
ttgcccgacgggcagcaccgcatctgggttcacattgccgaccctagccgctggctcaca
cctggcgacgcgctcgatttggaagcgcggcggcgctgcattacgctgtatttgccgacg
ggtatgacccccatgtttccgccagaactggccaccgggccgatgagcttggtgcagggg
cagttgtgtcatgcctttagctttggggtgttggtggatgcggatggcgcaatccagtcc
tacgagatgcacccgacgctcatcaagcccacctatcgcctgacctacgacgacgtagat
gagatgctgcaactgggcatccaggcagagccggagctagaaattttgtttcaaacggca
agtcagcggcagcgctggcggatgcagcagggcgcgatcagcattcaaatgccagaatcg
tccatcaaagtgactgaagacgacgaaattcggattgacgtgtttgaagaatccgcttct
cgaattctggtgtcagaaatgatgatcctggcgggcgaggtggctgggcgctatggcgag
gcgcatggcctgccgctgccgtttcgggggcaggaacagcccgaactcccgcctgaagag
gaattaatgctgttgccaccagggccagtgcggggctgtgcggttcgtcgctgcatgaag
cgcagtgaaatgggcgtgactccgatccgccacgcgggtctggggctggatgtctatgtg
caggtgacgtcgccaattcgccgctacgccgacttgctggctcactttcagatcaaggcg
catttgcagggcgatccgctgcccttttcgccagaggaaatgacggaactgctgcaaggc
atcggctccacgacttacgaaatggtgcaggtcgagcgccagacaaatcgttactggagc
ctggaatacctgcggcgcaatgcaaacgaagtctggccggcgctggtgctgcgctggctg
cgggagcatgaaaactttgggctggtgctgctagaagatttgggactggagatggcgatg
cgctttagccgaaccgtggaagtgggcgatcgcctcgatgtgaaagtgtcctatgtcgat
ccgcgccgcgacctgatccagttcgtggaaatcgatcaggccgttccccaggctgcctct
tga
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