Thermoleptolyngbya sichuanensis: HPC62_00840
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Entry
HPC62_00840 CDS
T06607
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
theu
Thermoleptolyngbya sichuanensis
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPC62_00840 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
theu03021
]
HPC62_00840 (rpoD)
Transcription machinery [BR:
theu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPC62_00840 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QKD80908
UniProt:
A0A6M8B3D8
LinkDB
All DBs
Position
186140..187270
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AA seq
376 aa
AA seq
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MTQANDVLETVDPTETDFEFVDEGDDGREDVFDIQPEDEAEEDDEKPAKGRSRRRTQVKK
KHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLVQDLAREPKHAEWA
SAVEMELPAFRHRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRA
AEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMG
RKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDGETPEDQVS
KSLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALR
KLRHPNRNSVLKEYIR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggcgaatgacgtactcgaaactgttgacccaaccgagactgattttgaattc
gtcgatgagggtgacgacgggcgtgaggatgtctttgatatccagccggaagatgaagct
gaggaagacgacgagaagccagcaaagggccgctctcgccgccgaactcaagtcaagaag
aagcactacaccgaagactccattcgtctctatcttcaagaaattggccgcattcgcctg
ctgcgggctgatgaggagattgagctagctcggaagattgcagatttgctggagctagag
cgcgttcgggagcggctagtgcaggacttggcccgcgaacccaagcacgccgagtgggca
agtgctgttgagatggagttgcctgcattccgtcatcgtcttcacgttggacggcgtgct
aaggacaagatggtgcagtccaacctgcgactggtggtgtccatcgccaagaagtatatg
aaccggggcctgtctttccaggacttgattcaggaaggcagtttgggtctgattcgggcg
gctgaaaagtttgaccacgaaaagggctataagttctcgacctacgccacctggtggatt
cgtcaggccattacgcgggcgatcgccgaccagtctcgcaccatccgccttccggttcac
ctctacgaaacgatttctcgcatcaagaagacaaccaagctgctgtctcaggaaatgggc
cgcaagccaactgaagaagaaatcgctactcgtatggaaatgaccatcgagaagctgcgg
ttcattgctaagtctgctcaactgccgatttcgctggaaacgccgattggtaaagaggaa
gattctcgcttgggtgactttatcgaatcggacggcgaaacgcctgaagatcaggtttcc
aagagcctgctgcgggaagatttggaaggtgtgctaagtaccctcagcccgcgtgagcgt
gacgtgctgcgtctgcgctacggcttggatgacggtcgcatgaagacgctggaagagatc
gggcagatcttcaacgtaacccgtgagcggattcgtcagatcgaggcaaaggccctccgc
aagctgcgtcaccccaaccgcaacagcgtgctgaaggaatatattcgctag
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