Thermoleptolyngbya sichuanensis: HPC62_02480
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Entry
HPC62_02480 CDS
T06607
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
theu
Thermoleptolyngbya sichuanensis
Pathway
theu03420
Nucleotide excision repair
theu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPC62_02480
03430 Mismatch repair
HPC62_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
theu03400
]
HPC62_02480
Enzymes [BR:
theu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPC62_02480
DNA repair and recombination proteins [BR:
theu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPC62_02480
MMR (mismatch excision repair)
Other MMR factors
HPC62_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
SinI
SAP
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QKD81189
UniProt:
A0A6M8B2B8
LinkDB
All DBs
Position
557436..559793
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AA seq
785 aa
AA seq
DB search
MQSPSQLSALNSQALGVELEALRDRLRPGQQRLADWTGGPLAVSAVPGSGKSTGMAIATA
ILLGRRYQNALRDRTLPSRQIFLVTFTRSAAANLRAKIRELLKELGLPTTGFSVYTLHGL
ALNIASRHPDLSELDLTRLTLITPERGNRLIKTAVEQWSALHPDLYRQLLEGQQVDAEET
ERLRRRSVLGTEILPNLANTAIHEAKSSGLSPDDVRAIAQSADFSPSYITEDGLNLLPNN
IALQVAAGLYEQYETLLHQRSFLDYDDMILAALRVLQNDEARQSWQQQVYAVFEDEAQDS
SPLQTRLLELLAADSHTGQPNLVRVGDPNQAINSTFTPADPLFFREFCAQCQRQGRLAEM
DQAGRSTQPIIDAANFLVQWVNNAPDRPLAASPLPFRLQAIRPVPPGDPQTDSNPPPEGE
GVEIRFPPDIYRSVDLIAQRVAELFAREPEARAAVLVRENRMGRFVATVLRNPTEYKLGA
DLGALGIAVYEVGERDRHSHVPGEILTLLQFCDRPHSPDNLKAALRVLADRQLIPPQDLD
ALSSQPEDFLYPGPLETPQPDPVVQARRYCAGLLRARVELPQFQLIPFLALTLNYDQTEL
ATADKLAARIAQQTASEPSLQFTLEVLSEIVQSERFEPVETEDIDTRYVRPKQLTIITMH
KAKGLDWDFVFLPFLQQQTIPGKAWVPPAQQFLGEFDLAEVARAQIRAQVHQSPLPDIHT
AWQQAQQLKIAEEYRLLYVAMTRARRLLWMAAERQAPFSWANPSNLQAQQPTPVLNALMQ
ALGRS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcctagtcagctttcagcccttaactctcaagcgctcggtgtggagctagaa
gccctgcgcgatcgcctgcgaccggggcagcagcgcctggccgactggacgggcgggccg
ctggcagtgtcggcggtgccggggtctgggaaatcgacgggcatggcgatcgccacggcg
attctgctgggacggcgctatcagaacgcattgcgtgaccgcaccctacccagccgccag
attttcctggtcaccttcacgcgctcggcggcggcaaacctgcgggcaaaaatccgtgag
ttgctgaaagaattgggactgcccaccaccggattttcagtctacacgctgcacggcctg
gcgctgaacattgccagccgccaccccgatttgtccgaacttgacctgacccggctgacg
ctgatcacgccggagcggggcaatcgcttgatcaaaactgccgtggagcagtggagcgcc
ctgcatcccgacctctatcgccagcttttggaagggcagcaggttgatgctgaggaaacg
gagcggctgcggcggcgatcggtgctgggcacggagattttgccaaatctggcgaacacc
gcgattcacgaagccaaaagttcgggtttgagtcctgacgacgtgagagcgatcgcccaa
agcgccgacttttctccgtcctacatcaccgaagacggcctcaaccttctacccaacaac
atcgccctgcaagtcgccgccggactctacgaacagtacgaaaccctgctccatcagcgc
agctttttggattacgacgacatgatccttgcagccctgcgcgttttgcaaaacgacgaa
gcgcggcaatcctggcagcagcaggtctacgccgtgtttgaagacgaagcccaggattcc
tcgcccctgcaaacgcgcctgctggaactgcttgccgccgattcccacaccggacagccc
aacctcgtccgcgttggcgatcccaaccaggccatcaactccaccttcacccctgccgac
ccgctgtttttccgcgaattttgcgcccagtgccagcggcagggccgccttgccgaaatg
gatcaggccggccgcagcacgcagcccatcatcgatgccgccaatttcctggtgcagtgg
gtcaacaacgcacccgatcgcccccttgctgcaagccccctcccctttcgcctccaggcg
atccgtcccgtgccccccggcgacccccaaaccgacagcaatccgccgccagagggcgaa
ggcgtggagatccgctttccgccggatatctaccgcagcgtggatttgatcgcccagcgg
gtagcggaactgtttgccagagagccagaggcgcgggcggcggtgctggtgcgcgaaaac
cgcatggggcgctttgtggccactgtgctacgaaatccgacggaatataagctgggtgcg
gatttgggggcgctgggcattgcggtgtatgaggtgggagagcgcgatcgccattcccac
gtccctggcgaaattttgaccctgctgcaattttgcgatcgcccccattcgcccgataac
ctaaaagcagcgctgcgggtgctggccgatcggcaactgattccgccccaggacctcgac
gcgctcagcagccagccggaagattttctctatcccggcccgctggaaacgccccagccc
gatccggtcgtgcaggcgcggcgctattgtgcgggcttgctgcgggcgcgggtagaattg
ccccagtttcaactgattccgtttctggcgctgacgctgaactatgaccagacggaactc
gccaccgccgacaaactcgctgcccgcatcgcccagcaaaccgccagcgagccgtcgctg
caattcacgctggaggtgctaagcgaaattgtccaatccgagcggtttgagcctgtggaa
acggaggacatcgacacgcgctacgtccgccctaagcaactcaccatcatcaccatgcac
aaggccaaggggctagactgggattttgtatttttgccatttttgcaacagcagacgatt
ccgggaaaagcctgggtgccgcctgctcagcaatttttaggtgaatttgacctagcagaa
gtggcccgcgcccagattcgcgctcaggttcaccagtcgcctttgcccgatatccacacg
gcctggcagcaggcgcagcagcttaaaattgcggaagagtatcgcctgctgtatgtcgcc
atgacccgcgcccgtcgcctgctgtggatggcggccgagcgtcaggctccctttagctgg
gcgaatccgtcgaatttgcaggcccaacagcccacgcctgttctgaatgcgctcatgcaa
gctctggggcgttcgtaa
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