Thermoleptolyngbya sichuanensis: HPC62_04600
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Entry
HPC62_04600 CDS
T06607
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
theu
Thermoleptolyngbya sichuanensis
Pathway
theu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPC62_04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
theu03021
]
HPC62_04600
03400 DNA repair and recombination proteins [BR:
theu03400
]
HPC62_04600
Enzymes [BR:
theu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPC62_04600
Transcription machinery [BR:
theu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPC62_04600
DNA repair and recombination proteins [BR:
theu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPC62_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
ANM3_zf-C2H2
Motif
Other DBs
NCBI-ProteinID:
QKD81559
UniProt:
A0A6M8B338
LinkDB
All DBs
Position
complement(1059158..1061032)
Genome browser
AA seq
624 aa
AA seq
DB search
MPKIEQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNSYVVLSPGNAENLSYKQLLTEDQWIEIEDQLYSEDSQL
TGVEVGIGAEALQRLLEDLDLEKEAEQLREEIATAKGQKRAKLIKRLRVIDNFIATQSKP
EWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLKIHQCGLPKEMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRNDPQIWDVLEE
VIDGHPVLLNRAPTLHRLGIQAFEPILVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
EAQAEARLLMLASNNILSPATGRPIVTPSQDMVLGCYYLTAENPNATKGKDRYFSSLEDV
IVAYEQQQVDLHAYVWVRFDGDVESPEPDNEPIEEQRSEDGIVTKLYKYRRVREDAEGNR
VSQYIRTTPGRIIYHKTIQEALVS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaattgaacagcggtttgactacgtgaagattgggctggcctcgccagagcgg
attcgccagtggggagagcgcaccctgccaaacggacaggtcgtgggcgaggtcaccaag
ccggaaacaattaactaccgcaccctcaagccggaaatggacggcttgttctgcgaacgc
atttttggcccggccaaggattgggagtgtcactgcggtaaatacaaacgggtgcgccac
cggggcatcgtctgcgagcgctgcggcgtggaggtgacggaatctcgcgtccgccgccac
cgcatgggctacatcaagctagcggctcccgtggcccacgtctggtatctcaagggcatt
cccagctacatggcgattttgctggatatgccgctgcgagacgtggagcagattgtctac
ttcaactcctacgtggttctcagccccggcaacgccgaaaacctcagctacaagcaactc
ctgaccgaagaccagtggattgagatcgaagatcagctttatagcgaagattctcagctc
actggggttgaagtaggcattggtgcagaagcgctgcaacgactgctagaagacctggat
ttggagaaagaagctgagcaactccgggaggaaattgccactgctaaggggcaaaaacgc
gccaagctgatcaagcggctacgggtgatcgacaacttcatcgctacccagtctaagccg
gagtggatggtgctggacgtgattccggtgattccgccagacctgcgcccgatggtacaa
ctggacggcggtcgctttgccacctccgacctgaatgatttgtatcgccgggtgatcaac
cggaacaaccgtctggctcggctccaggaaattctggctccggagatcatcgtccgcaac
gaaaagcggatgctgcaagaagccgtggacgcgctgatcgacaatggacggcgcggccgc
acggtggtcggagccaacaaccgcccgctcaagtccctgtcggacatcattgaaggaaaa
cagggtcgcttccgccaaaacctgctgggcaagcgggtagactactccggtcgttcggtt
attgtggtcggccccaagctcaagattcaccagtgtggtctgcccaaggaaatggcgatc
gagctatttcagccctttgtgatccaccgcctgattcgtcagggcttggtgaacaatatc
aaagcggcgaagaagctgattcagcgcaacgacccccagatttgggacgtgctggaagaa
gtgatcgacggtcaccccgtgctgctaaaccgtgctccaacgttgcaccgtctagggatt
caggcctttgaacccattctggtagacggtcgagcaattcagcttcacccgctggtgtgt
ccggcctttaacgcagacttcgacggagaccagatggcggttcacgtccccctctcgcta
gaagcccaggccgaagcccgcctgctgatgctggcctcgaacaatatcctctccccagct
acggggcgcccgatcgtcaccccaagccaggacatggtattgggctgctactatctgacc
gcagaaaaccccaatgctaccaagggcaaggatcgctacttctccagcttggaggacgta
atcgttgcctatgagcagcagcaggttgatttgcacgcctacgtttgggtgcggtttgac
ggcgatgtggagtcgccagagccggacaacgagccgattgaggaacagcgctccgaagat
ggcattgtcacgaagctctacaaatatcgccgcgtccgggaagatgccgagggcaaccgg
gtgtctcaatacattcgcacgaccccgggccgcattatttaccacaagacgatccaggaa
gcactcgtcagctag
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