Thermoleptolyngbya sichuanensis: HPC62_05935
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Entry
HPC62_05935 CDS
T06607
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
theu
Thermoleptolyngbya sichuanensis
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
theu03021
]
HPC62_05935
Transcription machinery [BR:
theu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPC62_05935
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_10
HTH_Tnp_ISL3
IF2_N
HTH_5
HTH_20
DUF4081
Packaging_FI
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QKD81798
UniProt:
A0A6M8B5P1
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All DBs
Position
1382644..1383600
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AA seq
318 aa
AA seq
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MKTSQASTDLVRTYLREIGRVPLLTHEQEILYGKQVQRLSLLQDVKAALSEQLGRSPSLK
EWADQAGLSVDELEQVVAEGENAKRRMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRQLAQ
QLGRAATVSELATELDMSVKQVREYLERARQPLSLDLRVGDNQDTELGELLEDTGPSPED
YAANSSLRNELEQLMAELTPQQREVLSLRFGLEDGRSLTLAKIGDRLNISRERVRQIERE
ALTKLRKRRADIREYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgagtcaagcctccaccgatctggttcgcacttaccttcgagaaattggacgg
gttcctctgctgacgcacgagcaggaaattctgtatggaaagcaggttcagcgtctgagc
ctgttgcaggacgtgaaggcggcgctgtcggagcagcttgggcgatcgcccagcctgaaa
gaatgggcagaccaggccggcctgtcggtcgatgagctagagcaggtggtggccgagggc
gaaaacgccaagcgccgcatggtagaggccaatttgcgcctagtggtgtctgtagccaaa
aaatatatcaagcgcaatgtggatttgctggatctgatccaggagggcacaattgggatg
cagcgaggcgtagagaagtttgacccaaccaaaggctatcgctttagtacctacgcctat
tggtggattcggcaggcaattacgcgggcgatcgccgagaaagggcgcaccattcgcctc
ccaattcacatcaccgaaaagctaaacaaaattaagaaagcgcagcggcagcttgctcag
cagcttggtcgagcagcaaccgtttcggaactggcgacggagctagatatgtcggtgaaa
caggtgcgcgaatatttggagcgggcacgccagcccctatcgctggatttgcgagtgggc
gataaccaggacacggaactgggtgagctgttggaagacacggggccgtctccggaggac
tatgctgccaattcttcgctgcgaaacgagcttgagcaattgatggcagagctaacgccg
caacagcgcgaagtcttgtcgctgcgctttgggctagaggatgggcgatcgctcacgctg
gccaaaattggcgatcgcctgaacatcagccgcgagcgggtgcgccagatcgagcgggaa
gccttgaccaaactgcggaagcgccgggccgacattcgcgaatacctggccagctag
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