Thermoleptolyngbya sichuanensis: HPC62_13175
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Entry
HPC62_13175 CDS
T06607
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
theu
Thermoleptolyngbya sichuanensis
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
theu03032
]
HPC62_13175 (topA)
03400 DNA repair and recombination proteins [BR:
theu03400
]
HPC62_13175 (topA)
Enzymes [BR:
theu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPC62_13175 (topA)
DNA replication proteins [BR:
theu03032
]
Prokaryotic type
DNA Topoisomerases
HPC62_13175 (topA)
DNA repair and recombination proteins [BR:
theu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPC62_13175 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QKD83019
UniProt:
A0A6M8B6K9
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All DBs
Position
3147720..3150617
Genome browser
AA seq
965 aa
AA seq
DB search
MSTLVIVESPTKAKTIRNYLPPGYRVEASMGHVRDLPQSASDIPASVKGEEWAKLGVNVD
ADFEPLYIVPQDKKKVVKALKEALKQADELILATDEDREGESISWHLLQLLQPKVPTKRM
VFHEITEEAIREALQNCRDVDEQLVHAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVNRERQRRAFRKGSYWDLKATLEKDGSSFESKLVTLGGCRIATGADFDESTGQ
IIAGRDVLLLGEAEAQALHDRLQSATWTVTGLEERSSTRKPSPPFTTSTLQQEANRKLRL
SARDTMRVAQSLYEQGYITYMRTDSVNLSQQAIAAARSCVQQMYGSEYLSPEPRRYSTKS
KGAQEAHEAIRPAGSTFRTPQETGLSGREFQLYDLIWKRTVATQMAEVRQTNITVQIQAE
DAGFRATGKRIDFPGFFRAYVEGSDDPDAAIENQEVILPVLREGDHPNCQELEAIAHETQ
PPARYTEASLVKTLESEGIGRPSTYASIIGTIIDRGYAQMVNNSLVPTFTAFAVTSLLEK
HFPDLVDTSFTARMERTLDDISTGEADWLPYLQQFYLGETGLDGQVKQRESQIDPAEARS
VDLEGLDAKVRIGRYGAYIETETEEGPVKATIPQDFTPSDLDAERVEVLLRQKTEGPDKL
GFHPETGEPIYVLIGAYGPYVQLGDVTDENPKPKRASLPKGVQPQDVTLEQAVNLLALPR
LLGMHPETGCKIQANLGRFGPYIVHDQGKNGKDYRSIKGDDDVLTITLERALELLAEPKA
GRGRGRAAAPIRELGPHPEDGEPVNLYNGPYGVYIKHGKLNASLPEGEKAESISMEAALK
ALAEKAATKKTSRRSSKTGDAGTKTSGTKTATKTTKTTRAKAGTAQSSTAKSSTTKSSTA
QSSTTKAAAAKKTTKSAKSTAEAEAEVTPTEPAPAKKTAAKSTPAKSTTQKAASTTRSTK
STKAS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctcgtcattgtcgaatcccccaccaaagcgaaaaccatccgcaactacctg
ccgccgggctatcgggtcgaggcatcgatgggccatgtgcgagatttgccccagtcggcg
agcgacattcccgcttcggtcaagggcgaagagtgggcaaaacttggggtcaacgtagac
gcagattttgagccgctctacatcgtgccgcaggacaagaagaaagtcgtcaaggctctg
aaagaggctctaaaacaggccgacgagctaatcctggcgacggacgaagaccgcgaggga
gaaagcattagctggcacctgctgcaactgctccagcccaaggtgcccacgaagcgcatg
gtgttccacgaaatcaccgaggaagccatccgcgaggccctgcaaaactgccgcgatgtg
gatgagcaactggttcatgcccaggaaactcggcgcattctagatcggctggtgggctac
acgctgtcgcccttgctgtggaaaaaaattgcctggggtctatcggcagggcgagttcag
tcggttgcagtacgcctattggtcaaccgcgaacggcagcgccgcgcttttcgcaaaggg
tcttactgggatctgaaggcgacgctggagaaagacggcagcagctttgagtcgaaactg
gtgaccctgggtggctgccgcattgccacgggggcagattttgacgaatcgacgggacaa
atcatcgccggacgcgatgtgctgctgctgggtgaggcagaggcccaggcgttgcacgat
cgcctccagtcggcaacctggactgtcacaggactagaagagcggtcttcgacacgcaag
ccctcgccgcccttcaccacctcgacgctgcaacaggaggccaaccgaaagctgcgcctg
tcggcccgtgatacgatgcgcgtggctcagagcctttatgaacagggctatatcacctac
atgcgaaccgactcggtgaatctgtcgcaacaggcgatcgccgccgctcgaagctgcgtt
caacagatgtatggcagcgaatacctcagccccgaaccgcgccgctattccaccaagagc
aagggcgcacaggaagcccacgaagccatccgtcccgcaggtagcaccttccgcacgccc
caggaaacgggcctgagcgggcgcgagtttcagctttatgacctgatctggaagcgcacg
gtggccacccagatggcagaagttcgccagacgaatatcaccgtgcagatccaggcagaa
gatgcgggattccgcgctacgggcaaacgcattgactttcccggctttttccgggcctac
gtggaaggatcggacgatcccgatgcggcaatcgaaaaccaggaagtgatcctgcctgtg
ctgcgggagggcgaccatccaaattgtcaggagttggaggcgatcgcccacgaaacccag
ccgcccgcccgctacaccgaagcgtccctagtgaaaacgctggaaagcgaaggcatcggt
cgccccagcacctacgccagcatcatcggcaccatcatcgaccggggctacgcccaaatg
gtgaacaacagtctcgtgcccactttcactgcctttgccgtcaccagcctgctcgaaaag
cactttcccgacctggtagataccagctttaccgctcgcatggagcgcacgctagacgac
atttccacgggcgaagccgactggctgccctatctccaacagttttacctgggcgaaacc
gggctagacgggcaggtgaagcagcgcgagagccagatcgaccctgccgaagcccgcagc
gtggatctggaggggctggatgccaaagtccgcattggccgctacggagcctatatcgaa
accgaaaccgaggaggggccggttaaagctaccattccccaagactttacgccgtctgac
ctggatgccgagcgggtcgaagtgctgctgcgtcaaaaaaccgaagggccggacaagctt
ggatttcaccccgaaacgggcgaaccgatttacgtgctgatcggagcctacggcccctat
gtgcagcttggcgatgtaacggatgaaaaccccaagcccaagcgcgcctcgctgcccaaa
ggcgtgcagccccaagatgtaacgttggagcaggcggtgaacctgctggcgctgccgcgt
ttactggggatgcacccggaaacgggctgcaagattcaggcgaacttgggtcgctttggg
ccctacatcgtccacgaccagggcaaaaacggcaaggactaccgctcgatcaaaggcgac
gacgacgtgctgacgattaccctggagcgagcgctggaactgctggcagaaccgaaggca
gggcgcggacgcggacgggccgcggctccgattcgagaattaggcccccacccggaagac
ggcgaacccgtgaacctctacaacggcccctacggcgtttacatcaagcacggcaaactt
aacgcctccctgcctgaaggcgaaaaagccgagtccatcagcatggaagcggccctgaaa
gcgctggcagaaaaagccgccaccaagaaaacctcgcgccgttccagcaaaactggcgac
gcaggcacgaagacttcgggcaccaagacagcgaccaaaaccaccaaaacaacccgcgca
aaggctggcacggctcaatccagcacggctaaatccagtacaactaaatccagcacggct
caatccagcacaactaaggcggccgctgcgaagaagacaaccaaatctgctaaatcgacg
gcggaggccgaagctgaggtaacgccaaccgaaccagcgcccgccaaaaaaacggcagca
aaatccacccctgccaagtccacaacccaaaaagcggcatccaccacgcgcagcaccaag
tccaccaaagcgtcctga
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