Thermoleptolyngbya sichuanensis: HPC62_15200
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Entry
HPC62_15200 CDS
T06607
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
theu
Thermoleptolyngbya sichuanensis
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
theu03021
]
HPC62_15200
Transcription machinery [BR:
theu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPC62_15200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_r3
HTH_24
HTH_23
Sigma70_ECF
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_Crp_2
HTH_8
LacI
HTH_3
HTH_10
HAUS5
Fe_dep_repress
HTH_38
ApoC-I
HTH_11
UPF0122
KORA
HTH_30
Xre-like-HTH
TPM_phosphatase
MarR
HTH_17
AbiEi_4
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QKD83362
UniProt:
A0A6M8BBB1
LinkDB
All DBs
Position
complement(3636968..3637750)
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AA seq
260 aa
AA seq
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MTATQPSLRSHSMELLMAYQQNKSVSIRNQLVKLNAGLVRKIAHRVSHQCAEPYEDLEQI
GYLGLIRAIERFNPSQGCAFSSFAVPYIRGEMLHFLRDRGSAVKVPRRWQDLQKEGQRVR
AELVKDLGRQPMDQEIAEHMGISVHEWREIKMAVRNRLPLSLDATVQQVDSSITLGETLP
DVRYQALQRLEEDRQQLQRALNQLEDKTRAAIEFVFFSDLSRKEVAERIGVSPMTVTRRI
QRGLEQMVSFLQMQTIQTGS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgacggccactcaaccttctctccgttcccacagcatggaattgctgatggcttatcag
cagaacaagtcggtgagcattcgcaatcagctcgtgaagttgaatgctggtctagttcgc
aaaattgcccaccgggtcagccatcagtgcgccgagccttacgaggatttagagcagatt
ggctatctgggtctgattcgggcaatcgagcggtttaatcccagccagggctgtgccttt
agttcctttgcagtgccctatattcgcggtgagatgctgcactttttgcgcgatcgcggc
agtgctgtgaaagttccccgccgctggcaagacttgcaaaaagaggggcagcgcgtgcga
gcagaattggtcaaagatctgggtcgccagccgatggatcaagaaattgctgaacacatg
ggcatttcagttcacgagtggcgtgaaatcaagatggccgtgcgtaaccgcctgcccctg
agcttggacgcaaccgttcagcaggtcgattcctctatcaccctcggtgaaacgctgccc
gatgtgcgttaccaagcgcttcagcgcctcgaagaagaccgtcagcagcttcagcgggcg
ctgaatcaactagaagacaagacccgcgcggcgattgagtttgtgttctttagcgacttg
tctcgcaaagaagtggccgagcgcatcggcgttagcccaatgaccgtgacgcgccgcatc
cagcgtggactggagcagatggtgtcgttcctgcaaatgcaaacgatccagacgggttcc
taa
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