Thermoleptolyngbya sichuanensis: HPC62_15960
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Entry
HPC62_15960 CDS
T06607
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
theu
Thermoleptolyngbya sichuanensis
Pathway
theu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPC62_15960 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
theu03019
]
HPC62_15960 (recQ)
03400 DNA repair and recombination proteins [BR:
theu03400
]
HPC62_15960 (recQ)
Enzymes [BR:
theu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPC62_15960 (recQ)
Messenger RNA biogenesis [BR:
theu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPC62_15960 (recQ)
DNA repair and recombination proteins [BR:
theu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HPC62_15960 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
HRDC
Helicase_C
RecQ_Zn_bind
HTH_20
Helicase_Sgs1
ResIII
HTH_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QKD83494
UniProt:
A0A6M8B8Y0
LinkDB
All DBs
Position
3849146..3851437
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AA seq
763 aa
AA seq
DB search
MPTPEEALKFYFGYDAFRPGQREIVEAAIAQRDQLVIMPTGGGKSICYQLPALLMDGVTI
VVSPLIALMQDQVQALQDNGIGAAFLNSSLGPTELRSTEQAVLAGQIKLLYVAPERLMGD
RFLPFLERIDAEVGIAAFAIDEAHCLSEWGHDFRPEYRQLKTLRQRYPAVPMTALTATAT
HRVQEDIVAQLALRDPRIHIASFNRTNLYYEVRPKQRDVYRHLLQLIRQAPGAGIVYCLS
RKKVDELAFRLQQDGIEALPYHAGLEDETRAANQTRFIRDDVRVMVATVAFGMGINKPDV
RFVIHYDLPRSLENYYQEAGRAGRDGDPAKCTLFFGYGDLNTVEFLIAQKVDPTTGAPLE
DEQRIARQQLRRVVDYAEGTECRRKIQLAYFGESFAGQCGNCDNCLHPRPVEDWTIDAQK
LLSCIARCKERFGMNHIIDVLRGSRSPKVLQHGHDQLSTYGIGKDRSAEAWKHLGRSLLH
QGLMDETTDGYSIPKLNAQSWEVMRGQRTVMIALPARSLDEPAPVGDRFLKQTGPKADSL
FERLRQLRKRLADAQNVPPYVVFSDVSLRQMAEKQPHTLREFARISGVGSRKLEQYGETF
VTEIRDFCTENDIPLRSPSLGTIPSNSDDDSFDPTLAYAKPPRDRSESRSALRLKSVSRT
VFYTLELHQQGLSPAEIAEKRGCGIHTIYNHLDKLLEAGQAVDLGKLVEGDRQAKIERAI
EAVGTASLKAIYEHIQNTLGETIDYDSIRLVRAKWRHTNRPDS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccccgaagaagccctcaaattctacttcggttatgatgcctttcgccccgga
cagcgggagatcgtcgaagcggcgatcgcccagcgggatcagcttgtaatcatgcccaca
ggcggcggcaagtcgatttgctaccagcttccggcgctgctgatggacggggtgacgatc
gtcgtgtcgccgctgattgcgctgatgcaggatcaggttcaggcattgcaggacaacggc
attggggcggcgtttttgaatagcagcctggggccgacggagctgcgatcgacggaacag
gccgtgctggcgggccagatcaagctgctgtatgtcgcgccagagcgactgatgggcgat
cgctttttgccgtttttggaacgcatcgatgccgaagtgggcattgccgcctttgccatc
gacgaagcccactgcctgtcggaatgggggcatgactttcgtcctgaatatcgccagctc
aaaaccctgcgccagcgctatcccgccgtgcccatgacagcgctgacggccaccgccacc
caccgcgtccaggaagatatcgttgctcagcttgccctgcgcgacccgcgcatccacatc
gccagcttcaaccgcacgaacctgtattacgaagtgcgtcccaagcagcgcgatgtgtat
cgccacctgctgcaactaattcgccaagcccccggcgctggcattgtctattgcctcagc
cgcaaaaaagtagacgaactcgccttccgactccagcaagacggcattgaggcgctgccc
tatcatgcgggactggaggacgaaacccgcgctgcgaatcaaacgcgctttattcgcgac
gacgtgcgcgtgatggtggcgacggtcgcctttggcatgggcatcaacaagcccgacgtg
cggtttgtgattcactatgacctgccgcgcagcctggaaaactactatcaggaggcaggg
cgggccgggcgcgatggcgatccggcaaaatgcacgctgttcttcggctatggcgatttg
aacacggtcgagtttctgattgcccagaaggtcgatccaacgaccggagcgccgctagaa
gacgagcagcgcatcgcccgccagcagttgcgccgcgtggtggactatgccgaagggaca
gagtgccgccgcaagattcagttggcctactttggcgaaagctttgcagggcagtgcggc
aactgcgacaactgcctgcatccgcgccccgtggaagactggaccatcgacgcgcaaaag
ttgctgtcctgtattgcccgctgcaaagagcgttttggcatgaaccacatcatcgacgtg
ctgcgcggctctcgcagcccaaaagtgctacaacatgggcacgatcagctttccacctac
ggcattggcaaagaccgcagcgccgaagcctggaaacatctggggcgatcgctcttgcac
caaggcttgatggacgaaaccaccgatggctattccatccccaagctgaatgcccaaagt
tgggaggtgatgcggggtcagcggacggtgatgattgccctgcctgcgcgatcgctcgat
gaacctgcccccgtgggcgatcgcttcttgaaacaaaccgggcccaaagccgacagcctg
tttgagcgcctgcgccagttgcgaaagcgcctcgccgacgcgcaaaacgttccgccctac
gtggtcttttctgatgtcagcctgcggcaaatggcggagaaacagccgcacacgctgcgt
gagtttgcgcggatctctggcgtgggcagccgcaagctagagcaatacggtgaaacgttc
gttaccgaaatccgcgacttttgcacagagaatgacattcccctgcgatcgcccagtctg
ggaaccatccccagcaattccgatgatgattcatttgatcctacactcgcctatgccaaa
ccaccgcgcgatcgtagtgaatctcgttcggcgctgcgtcttaaatctgtgtctcgcact
gtgttctatacgctagaactgcatcagcagggcttgtcacccgcagagattgccgaaaag
cgcggctgcggcatccatacgatttacaaccacctggataagttattagaagcggggcag
gcggtggatctgggaaagctggtagagggcgatcgccaggcaaaaattgaacgggcgatc
gaagcggtaggcactgcgtcgctcaaggcgatctacgaacacatccaaaacacgctgggc
gaaacgattgactacgactctattcgcctcgtccgtgccaaatggcgacataccaatcgc
ccagatagctag
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integrated database retrieval system
