Thermoleptolyngbya sichuanensis: HPC62_18175
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Entry
HPC62_18175 CDS
T06607
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
theu
Thermoleptolyngbya sichuanensis
Pathway
theu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPC62_18175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
theu03019
]
HPC62_18175
03016 Transfer RNA biogenesis [BR:
theu03016
]
HPC62_18175
Enzymes [BR:
theu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HPC62_18175
Messenger RNA biogenesis [BR:
theu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HPC62_18175
Transfer RNA biogenesis [BR:
theu03016
]
Prokaryotic type
tRNA degradation factors
HPC62_18175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
aRib
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QKD83861
UniProt:
A0A6M8BJR5
LinkDB
All DBs
Position
complement(4365206..4367356)
Genome browser
AA seq
716 aa
AA seq
DB search
MFDEIDKSISFDGRDIRLKVGLLAPQAGGAVLVQSEDTAVFVTATRASAREGIDFLPLLV
DYEERLYAAGRIPGGFLRREGRPPEKATLVSRLIDRPLRPLFPGWLRDDIQVVATTMSMD
ERVPPDVLAVTGASIATLLAKIPFNGPMAAVRVGLIGDDFIINPTYKEIEEGDLDLVVAG
SPEGVIMVEAGANQLPEQDMIEAIDFGYEAVRDLIQAQLDLIKELGIELVKEAEPEVDST
LEDFIGDRTTQAIKEILTHFEYTKGERDEKLEEVKAAVAAEIAEMPEDSPIRMAAEANPK
ALPTVFKSVTKKLMRKQIIEDGVRVDGRKLDEVRKISCRTGVLPSRVHGSALFQRELTQV
LSVVTLGTPGDAQEMDDLHPDEEKRYMHHYNMPPYSVGETKPMRSPGRREIGHGALAERA
LVPVLPEKSDFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPISKPVSGAAMGLIK
EGDEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKITGLPVSVVADAINQARAAR
LHILEKMLAAIDKPRAELSPYAPRLLTIKIDPEFIGMVIGPGGKTIKGITEQTGAKVDIE
DDGTVTISAIDGEKAKAARAIIEGMTRKLSAGDVYVGKVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIVKVREIDQRGRINLTRLGIHPDEATAAREAAAQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgaaattgacaagtcgatatccttcgatggcagggatattcggctgaaggtg
gggctattggctccccaggcaggcggcgcagtgctcgtgcagtcagaagataccgctgta
tttgtgacagcgacccgtgcctcagcgcgagagggaatcgactttttgccgctgctggta
gattacgaagagagattatacgcggcagggcggattccgggtggttttttgagacgggag
gggcgaccccctgaaaaggcaacgctcgtgagtcgattaatcgatcgccccctgcgcccc
ctgtttcctgggtggttgcgggacgatattcaggttgtggccactacgatgtcgatggat
gagcgagtgccgcccgatgtgctggccgtcacgggtgcttcaatcgccacgctgttggcc
aagattcccttcaatggtccaatggcggcggtgcgtgtcgggctaattggcgacgacttt
attatcaaccccacctacaaagagattgaggaaggcgatctcgatctggtggtcgcaggt
tcgcctgaaggcgtgatcatggtggaagcgggcgcaaaccagcttccggagcaggacatg
atcgaggcgatcgactttggttatgaagcggtgcgcgacctgattcaggcgcagcttgac
ctgatcaaggaactgggcatcgaactggtgaaagaagcggagccagaagtcgattctacg
ctagaagactttatcggcgatcgcaccacacaggctatcaaagaaatcctgacgcacttt
gaatacacgaagggcgagcgtgacgaaaagctagaggaagtgaaagccgccgttgccgct
gaaatcgccgaaatgcctgaagatagccccatccgcatggcggccgaagccaaccccaaa
gccctgcccaccgtgtttaagagcgtcaccaaaaagctgatgcggaagcaaattatcgaa
gacggggtgcgcgtggacgggcgcaagctggatgaagtccgcaagattagctgccgcaca
ggggttttgcccagccgggttcacggtagcgccctgtttcaacgggagctaacccaggtg
ttgtcggtggtgacgctgggcaccccaggcgacgcgcaggaaatggacgacctgcatccc
gacgaagaaaagcgctacatgcaccactacaacatgccgccctactcggtcggggaaaca
aaaccgatgcgatcgcccggccgccgcgaaatcggccacggggccctggcagagcgggcg
ctggtgccagttttgcccgaaaaatcggacttcccctatgttatccgcgtcgtatccgag
gtgctgtcttccaacggctccacctcgatggggtcggtctgtggctccaccttggcgctg
atggatgcgggcgtgcccatttccaagcccgtcagcggagccgctatggggctgatcaaa
gaaggagatgaagtccgcatcctgaccgacattcagggcatcgaagacttcctcggcgac
atggacttcaaggtggcgggcaccgacacgggcatcacggcgctgcaaatggacatgaag
attacggggctgcctgtctcggtcgtggcggatgcgatcaaccaggcccgcgccgcccga
ctgcacatccttgaaaaaatgctagccgccatagacaagccccgtgctgaactgtcgccc
tatgcaccgcgcctgctgacgatcaaaattgaccccgaatttatcggcatggttatcggc
cccggcggcaagaccatcaagggcataaccgagcagaccggagccaaagtcgatatcgaa
gacgatggcaccgtcactatttctgcaatcgacggcgaaaaggcaaaggctgcccgcgcc
atcatcgagggcatgacccgcaagctcagcgcaggcgatgtctatgtgggcaaagtgacg
cgcatcattcccatcggcgcatttgtggaattcctccccggcaaagagggcatgatccac
atttcgcaactggcggattatcgcgtgggcaaggtcgaggatgaagttgccgttggcgat
gaggtgatcgtgaaagtgcgcgagatcgaccagcgcggacggatcaacctgactcgtctc
ggcattcatcccgacgaggcaaccgcggcgcgggaagcagccgcgcagtag
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