Thermodesulfomicrobium sp. WS: TDMWS_00890
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Entry
TDMWS_00890 CDS
T08730
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
thew
Thermodesulfomicrobium sp. WS
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thew01002
]
TDMWS_00890
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thew01011
]
TDMWS_00890
Peptidases and inhibitors [BR:
thew01002
]
Cysteine peptidases
Family C82
TDMWS_00890
Peptidoglycan biosynthesis and degradation proteins [BR:
thew01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TDMWS_00890
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BDV00004
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Position
complement(91358..92890)
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AA seq
510 aa
AA seq
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MKFGLALAAVFLMLGQAAADTELLWFSDGRPTPQALEALHILASAEDEGLAPEDYGVDRL
RGALENILWSRERSADIFRWDAELTEAVLRFLRHLQLGRVDPASVQVHFSGIGRRAVVSQ
ERLRAALSQGQLAQLVEEVTPKVPLYRQIREALGRYRRMAADPQVMALWAQPLPALPADK
VTPGQSYLGLPLVVRRLKALGDLPPDVPESSVLTPSIVRGLRQFQERHGLLADGVLGGRT
VARLNVSPAAGVRQMELTMERLRWVDFDSSRIIAVYLPENVLEASTVDAAGTVAVHLRMR
VITGNAAQTPTPLLEDTIRAIELSPYWNVPVSIVRDELTSKFLKDPEAFSREGFEFVLGD
GHVESSLTLERLQDAARGRIRLRQRPGPTNPMGDIKFVISNKDAIYLHHTANPQLFSRAR
RDLSHGCIRVEDPVRLAQFVLDDDPAWDAERLQAAMGQSTPTILRVRRPPRVVLIYSTVR
VQDGRVAFLADLYGLDRLLDQALRHVPSNP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgggctggcgttggccgccgttttcctgatgttggggcaggcggcggcggat
acggagcttttgtggttttccgatgggcgtcccacgccccaggccttggaagcgctccat
atcttggcctcggccgaggacgaggggttggcccctgaagactacggagtggaccgactg
cggggggcgttggaaaacatcctctggagtagggagcgttccgcagatatttttcgctgg
gatgcggagcttaccgaggccgtgctccggttcctgaggcatctgcaactgggccgggtg
gacccagcttcggtgcaggtgcatttttcgggtatcgggcggcgggcggtggtctcccaa
gagcgtctccgtgcggcgctctcccaggggcaactggcccagctcgtggaggaagtgacc
cccaaggtccctctgtatcggcagattcgggaagcgttgggccggtaccggcgcatggcg
gccgatccccaggtgatggccttgtgggcgcaaccattgccagcgcttccggcggacaag
gtcacccctggccagagctatctcggccttcctctcgtggtgcgccgcctcaaggccctc
ggagatttgccgccggatgtgcccgagtcttcggtgctgacgccatccattgtccggggg
ctccgccagttccaggaacgccatgggctcttggcggatggcgtcttgggggggcgtacc
gtggcgcggctcaatgtttcgcctgcggctggggtgcggcagatggagcttaccatggaa
cgattgcggtgggtggatttcgacagtagccgcattatcgccgtgtacttgccggagaac
gtcctcgaggcctccacggtggacgctgccggaaccgtggccgtgcacctgcgtatgcgg
gtcatcaccggcaatgccgcccaaacccccaccccgctgctggaagataccatccgggcc
attgaactcagcccgtattggaatgtccccgtctccatcgtccgggacgaactgacctcg
aaattcctcaaagaccccgaggccttttcccgggaaggtttcgaattcgtccttggggac
ggacatgtggaatcgagcttgaccctggagcgtcttcaggatgcggcacggggacgtatc
cggctgcggcagcgccctggtcccacgaatcccatgggggacatcaagttcgtcatctcc
aacaaagatgccatctatttgcatcatacggccaacccgcaacttttttcccgtgctcgt
cgcgacctcagccatggttgcattcgtgtggaagacccggtaaggctcgcccaattcgtg
ctcgatgatgacccagcttgggatgccgagcgactgcaggcggccatgggacagagtact
cccacgatcctgcgggtgcgtcggcctccgcgtgtggtcctcatctattccacggtgcgg
gtccaggacggtcgggtggcctttctcgccgatctgtatggtttggatcgtctcttggat
caggccctgcgccatgttccttccaacccatga
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