Thermodesulfomicrobium sp. WS: TDMWS_01240
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Entry
TDMWS_01240 CDS
T08730
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew02024
Quorum sensing
thew03060
Protein export
thew03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
TDMWS_01240 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TDMWS_01240 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TDMWS_01240 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
thew02044
]
TDMWS_01240 (ffh)
Enzymes [BR:
thew01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
TDMWS_01240 (ffh)
Secretion system [BR:
thew02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
TDMWS_01240 (ffh)
Eukaryotic Sec-SRP protein
TDMWS_01240 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_33
Zeta_toxin
APS_kinase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BDV00039
LinkDB
All DBs
Position
complement(126474..127928)
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AA seq
484 aa
AA seq
DB search
MFDSLSDRLESVFKKLRGHGRLDEKNIQEGLREVRLALLEADVHFDVVRGFVERVRQRAL
GQEVQGSLTPGQQVIKIVHEELIALLGGEHEGLAFAGKPPYAVMMVGLQGSGKTTSAAKL
ALFLRRRKMSPYLVPADVYRPAAIDQLRKLGAELGVPVFASTVEMNPVDICRQGLAEAAR
LGHSVVIFDTAGRLHVDEALMNELVAIKAACAPQEILFVADAMTGQDAVTVAQAFDATLD
ITGVVLTKMDGDARGGAALSIKSITGKPLKFVGTGERPSEFEVFYPDRIASRILGMGDVL
TLIEKAQSTIDAKEAERIQDRMRKAEFDFEDFRTQMRRIRKLGSIEGLLALIPGMGKLRK
QLQDVRLPDKEMAKVEAMINAMTVAERRNPKMIDTSRRQRIARGSGVTVADVNALIKNFE
QMRGLMQQMLQGKMPTAPGGAAPGMPTMPGMPGLPGAGGGRRSAVDRDKLREKRKKERKQ
RKRK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatagtctgtccgatcgactggagtcggtattcaagaagttgcgcggccacggc
cgcctggatgagaaaaacatccaggaggggctgcgggaggtgcgtcttgcccttttggag
gcggacgtccattttgacgtggtgcgcggtttcgtggagcgggtgcggcagcgcgccttg
ggtcaggaggtgcagggcagtcttaccccggggcagcaggtcatcaagatcgtccatgag
gagctcatcgcgcttttggggggcgaacacgaagggctcgcatttgcgggcaagcctccg
tatgcggtgatgatggtggggctgcaggggtcgggcaagaccacgtcggccgccaagctg
gccttgtttttgcgtcggcgcaagatgagcccgtatttggtccctgcggacgtctaccgt
ccggcggccatcgatcagctccgtaaattgggggcggagctgggggtgccggtgtttgcc
tccacggtggagatgaatcccgtggacatctgccgccagggcttggccgaggccgcccgc
ttggggcactcggtggtgatcttcgataccgcgggccggctgcacgtggacgaagccctc
atgaacgagttggtggccatcaaggcggcctgcgcgccccaggagatcctgttcgtggcc
gacgccatgaccgggcaggatgcggtcaccgtggcccaggcctttgacgccaccctggac
atcacgggcgtggtgctcaccaagatggatggcgacgcccgtggcggtgcggccctgtcc
atcaagtccatcacgggcaagccgctgaaattcgtgggtactggcgagcggcccagtgag
ttcgaggtattctacccggaccggatcgcgtcgcgcatcctgggcatgggggacgtgctc
accctcatcgagaaggcccagagcaccattgatgccaaggaggccgagcgcatccaggac
cgcatgcgcaaggcggagttcgacttcgaagattttcgcacgcagatgcggcgcattcgc
aagttgggctccattgaggggctactggccttgatcccgggtatggggaagctgcgcaag
cagctccaggacgtgcgcctgccggacaaggaaatggccaaagtggaggccatgatcaac
gccatgaccgtggccgagcgccgcaaccccaagatgatcgataccagccgtcgtcaacgc
attgcccggggaagcggcgtcacggtggcggacgtcaatgcgctcatcaaaaatttcgag
cagatgcgtggcctcatgcagcagatgctccaaggcaagatgccgacggctccaggcggg
gctgcgcccgggatgccgacaatgcccgggatgccggggctccctggggcaggtggaggg
cgccgcagcgccgtggatcgcgacaagcttcgggagaagcgaaaaaaagagcgtaagcag
cgcaaacgcaagtaa
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