Thermodesulfomicrobium sp. WS: TDMWS_01290
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Entry
TDMWS_01290 CDS
T08730
Name
(GenBank) lytic transglycosylase
Organism
thew
Thermodesulfomicrobium sp. WS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
LysM_RLK
SLT_2
Motif
Other DBs
NCBI-ProteinID:
BDV00044
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Position
complement(133718..135286)
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AA seq
522 aa
AA seq
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MSGIVQKTVIALLLLGMGVGCASPRLSHKGAEDAITGAGTVHEPGTSVSSGSVAVKDDVI
AFPEQGVGPEGSSVKPSAQASTAPGVLGIAVVEEETVQQYFSLYTEKNRDTFVGGVQRAQ
VYLPALRERLRTAGLPEELVYLPLVESAFDPSATSSAGAAGIWQLMPETARRFGLRVDWW
VDERRDIFRATDAAISYLKYLYAQFGDWKLALAAYNAGEGAIDRAMKSSGAQTLEAVSGA
RLSDQTRNYVPKFAAAVRAVRHLEHAGILAPRRERPLSLISIAVRGATDLQDLARAVGIP
WQEFHALNAQYLRKATPPFGTSTVRVPAPYAAQARQYLDRESGLRPVAGLVPYTVRAGDS
WDALAKRAKVAARELVTINGGARLVPGRVVYLPARSQGHGEAAPKKAPKAVGGQANYAVR
PGDTLSSIARKFGVTPAALAAANNLARDGALRPGQGLFIPAAADAPQPKAAAAPRSYVVQ
PGDTLWAIARRFGAAPEDVLRWNRLHPDAPLRPGDTVLVQAP
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggggattgttcagaaaacggtgattgcgcttctgcttctggggatgggcgtgggc
tgtgcttccccccgtctctcccataagggggctgaggacgccatcacaggagccggtacg
gtccacgaaccgggcacctccgtgtcctccggctccgtcgcggtcaaggacgatgtcatc
gcattcccggaacaaggcgtggggcctgagggttcttcggtgaagccgtcagcgcaggca
tccacggcccctggggtattgggcatcgccgttgtcgaagaagaaaccgtccagcagtat
ttttcgttgtacaccgaaaaaaaccgcgacacttttgtcggcggggtgcagcgcgcccag
gtgtacttgccggcgttgcgggagcgcttgcggactgcgggcttgcccgaggagctcgtc
tacctccctttggtggaaagcgcctttgatccttccgcaacatcttcggcgggggccgcc
ggcatttggcagctcatgcccgagactgcccgccgctttggactgcgcgtggattggtgg
gtggacgaacgccgggacatctttcgcgccaccgacgcggccatcagctatctcaaatat
ctgtacgcgcagtttggtgattggaagctggcgctcgctgcgtacaacgcaggcgaaggc
gccattgatcgggccatgaagtcgtcgggcgcgcagaccttggaagccgtcagtggggcg
cgcttgagtgatcaaacccgcaattacgtgcccaagttcgccgctgcggtgcgcgccgtc
cgacacttggagcacgcggggatactcgcgcctcggcgagagcggcctttgtcgttgatc
tccattgcggtgcgcggggccaccgacctgcaagacttggcccgggcagtggggatcccg
tggcaggagttccatgccctcaatgcccaatacctccgcaaggcgactccgcctttcggg
acgagcacggtgcgcgtccctgccccgtatgctgcgcaggctcgccagtacctcgaccgt
gagtcgggcttgcgccccgtggccggacttgtcccgtatacggtgcgcgctggggactct
tgggatgctttggccaagcgtgccaaggtcgccgctcgcgagctcgtgaccatcaatggc
ggcgcgcgcctcgtgccgggaagggtggtgtatttgccggcgcgctcccaagggcatggg
gaggccgccccgaaaaaagccccgaaggcagtgggcggacaggccaattatgctgtgcgc
cctggggatacgttgtcgagtatcgctcgcaagtttggcgtgacaccagccgcccttgcg
gcagcaaacaaccttgcccgggatggggcccttcgcccggggcaagggttgttcattccc
gctgctgctgatgccccgcaacccaaggcagcggctgctccgcgttcctatgtggtgcag
cccggcgatacgctttgggcaatcgcccgcaggtttggtgcggccccagaagatgtcctt
cgctggaatcggctccatcccgatgccccgcttcgccccggagacaccgtgctggtgcaa
gccccttag
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