Thermodesulfomicrobium sp. WS: TDMWS_04620
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Entry
TDMWS_04620 CDS
T08730
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
thew
Thermodesulfomicrobium sp. WS
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thew03009
]
TDMWS_04620 (rimO)
Enzymes [BR:
thew01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TDMWS_04620 (rimO)
Ribosome biogenesis [BR:
thew03009
]
Prokaryotic type
ribosomal protein modification factors
TDMWS_04620 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BDV00377
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Position
482993..484351
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AA seq
452 aa
AA seq
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MDGVIRVATVSLGCPKNRVDTERILGGLGAHYQPAQSPEAAQVLLVNTCGFLQAAVEESL
DTIMEMVRVAQQAPSRPLVVVTGCLVARYGAHVLQQELPEVDLVVDIAGQHQLPERILRH
FGLQSAADGRVVSTPPSFAYLKVAEGCSNRCRFCTIPSIRGGLRSRPLEELVAEASACVA
AGRRELVLVAQDLTAYGQDLGMRRGLAQLLDALARVPGLSWLRLMYLYPSGLTEELLAGM
RDLGAPVLPYFDIPFQHVHPEILAAMGRPFRTQDPRAVVERVRRYFPQAALRTSLIVGYP
GETDAHFAALESFVAEAELAHVGVFAFSPEEGTPAAALDQQVPARVRQSRRRRIMALQRR
ISRRYLARFRDQELEILVDQPSAEWPGLFEGRAWFQAPEVDGVAYVSGPQVRPGAMVRAR
VDATHDYDLVTLAEDAGDEEGCDFRPMDADGL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgtgattcgtgtcgccacggtgagcttgggatgccccaaaaaccgtgtggac
accgagcggattttgggcggccttggcgcgcactaccagccggcgcaatccccggaagcg
gcccaggtgctgctggtcaatacctgcggatttctgcaggctgcggtggaagaatctctc
gataccatcatggagatggtgcgtgtggcgcaacaggcgccttcccgtccgctcgtggtg
gtgaccggttgcctcgtggcccgctacggcgcgcacgtgttgcagcaagagctgccggag
gtggatctcgtggtggacatcgccgggcagcaccaattgccggagcgtattttgcgccac
tttggtctgcagtccgccgccgatggccgcgtggtgagcacgccacccagctttgcctac
ctgaaggtcgcggaaggctgctccaatcgctgccgtttttgcaccattccgtccattcgg
gggggcttgcgcagccgtccgctggaggaattggtggccgaggcctcggcctgcgtggct
gcaggacggcgggagctggtgctcgttgcccaggatctgaccgcctacggccaggatttg
ggcatgcgccgggggctggcgcagttgctcgatgccttggcgcgtgtgccgggtctctcg
tggctgcggctcatgtatctctatccgtcggggctcacggaagagcttttggccggcatg
cgcgacctgggggcgccggtgctcccgtacttcgacatcccgttccagcatgtccatccc
gagattttagccgccatgggtcggccctttcgtactcaagatccgcgcgctgtggtggag
cgggtgcggcgctattttccccaggcagccctgcggacctcgctcatcgtgggatacccc
ggtgagacggatgcgcattttgcggcgctggaatcgtttgtggccgaggcggagctcgcc
cacgtgggggtgtttgccttttctccggaagagggcacaccggcggctgccttggaccag
caggtgccagcgcgggtgcgccagagtcggcggcggcggatcatggccttgcagcggcgc
atcagccgtcggtatttggcccgtttccgggatcaggagttggagatccttgtggatcag
cccagcgccgaatggcctgggcttttcgagggccgggcgtggttccaggccccggaggtg
gacggggtggcgtacgtgagtggccctcaagtacggcccggggccatggtgcgcgcccgg
gtggacgccacccatgattacgatctggtgacgttggcggaagatgctggggacgaagaa
gggtgcgatttcaggcctatggatgcggacggactgtga
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