Thermodesulfomicrobium sp. WS: TDMWS_05440
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Entry
TDMWS_05440 CDS
T08730
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDMWS_05440 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thew03019
]
TDMWS_05440 (groL)
03110 Chaperones and folding catalysts [BR:
thew03110
]
TDMWS_05440 (groL)
03029 Mitochondrial biogenesis [BR:
thew03029
]
TDMWS_05440 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thew04147
]
TDMWS_05440 (groL)
Enzymes [BR:
thew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TDMWS_05440 (groL)
Messenger RNA biogenesis [BR:
thew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TDMWS_05440 (groL)
Chaperones and folding catalysts [BR:
thew03110
]
Heat shock proteins
HSP60 / Chaperonin
TDMWS_05440 (groL)
Mitochondrial biogenesis [BR:
thew03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TDMWS_05440 (groL)
Exosome [BR:
thew04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TDMWS_05440 (groL)
Exosomal proteins of other body fluids (saliva and urine)
TDMWS_05440 (groL)
Exosomal proteins of breast cancer cells
TDMWS_05440 (groL)
Exosomal proteins of colorectal cancer cells
TDMWS_05440 (groL)
Exosomal proteins of bladder cancer cells
TDMWS_05440 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
REF
Motif
Other DBs
NCBI-ProteinID:
BDV00459
LinkDB
All DBs
Position
582359..583996
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKVIKFDVKARERLKKGVDTLADAVKVTLGPKGRNVVIEKSFGSPVITKDGVTVAKEI
ELEDKFENMGAQMVKEVASKTSDVAGDGTTTATILAQSIFHEGVKLVAAGRNPMAIKRGI
DKAVDAVVAALDKLAKPTRDQKEIAQVGTISANNDATIGNIIAEAMSKVGKEGVITVEEA
KGLETTLEVVEGMQFDRGYLSPYFVTNPDKMVCELDSPLILINEKKISNMKELLPILEQV
AKMGKPLLIIAEDVEGEALATLVVNKLRGTLQVVAVKAPGFGERRKAMLQDIAILTGGEV
VSEDLGVKLESITLNQLGRAKRIVVDKENTTIVDGAGDPEKIKARVKQIRTEIEETTSDY
DREKLQERLAKIVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVALV
RCQSALNDVKASDDDEAAGVEVVRRAMEAPLRQICANAGVEGAVVIEKVREGAESFGYNA
ATGEYEDLIAAGVIDPKKVTRIALQNAASVAGLLLTTECAIAEKPKEETPAAGHGGMGGG
MGGMY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagtcattaagtttgatgtcaaggctcgtgagcgtttgaaaaaaggtgtg
gataccctggcggatgccgtgaaggtcactcttggtcccaagggccgcaacgtggtcatc
gaaaagtcctttggctctccggtgatcaccaaagacggcgtgaccgtggccaaggagatc
gagctggaagacaagttcgagaacatgggcgcccagatggtgaaggaagtggcgtccaag
acctcggacgtggctggcgacggcaccaccacggccaccatcctcgcccagtccatcttc
cacgagggcgtgaagctggtggctgccggccgcaaccccatggccatcaagcgcggcatc
gacaaggcggtggacgcggtggtggcggccttggacaagctggccaaacccacgcgggat
cagaaggagatcgcccaggtgggcaccatctccgccaacaacgacgccaccatcggtaac
atcatcgccgaggccatgagcaaggtgggcaaagagggcgtcatcaccgtggaggaggcc
aagggcctggaaaccacccttgaggtggtggagggcatgcagttcgaccgcggttacctc
tccccctacttcgtcaccaatcccgacaagatggtgtgcgagctcgattcgcccctcatc
ctcatcaacgagaagaagatttccaatatgaaggagctcctgcccattttggagcaggtg
gccaagatgggcaaaccgctgctcatcatcgcggaagacgtggaaggcgaggccttggcg
accctggtggtcaacaagctgcgcggcaccctgcaggtggtggcggtgaaggccccgggc
tttggcgagcgccgcaaggccatgcttcaggacatcgccatcctcaccggtggtgaagtg
gtgtccgaggacttgggcgtgaagctggagagcattaccctcaaccagttgggccgcgcc
aagcgcatcgtggtggacaaagagaataccaccatcgtggacggcgctggtgatcccgag
aagatcaaggcccgcgtgaagcagatccgcaccgaaatcgaggagaccacctcggattac
gaccgcgagaagctccaggagcgcctggccaagatcgtgggtggtgtggccgtgatcaac
gtcggtgctgccaccgagaccgagatgaaggaaaagaaggcgcgcgtggaagacgccctc
aacgccacccgcgctgcggtggaagaaggcatcgtccccggcggtggcgtggccttggtg
cgctgccagtcggccctgaacgacgtcaaggcttccgatgacgacgaggccgcgggtgtg
gaagtggtgcgccgcgccatggaggccccgctgcgtcagatctgcgccaacgcgggcgtg
gaaggtgcggtggtcatcgagaaggtgcgcgaaggtgccgagtcctttggctacaacgcc
gctaccggcgagtacgaggacctcatcgccgcgggcgtcatcgatcccaagaaggtgacc
cgtatcgcgctgcagaacgccgcttcggtggcgggactgctcctcaccaccgagtgcgcc
attgccgagaagcccaaggaggagactccggcggctggccatggtggcatgggtggcggc
atgggcggcatgtactaa
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