Thermodesulfomicrobium sp. WS: TDMWS_05940
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Entry
TDMWS_05940 CDS
T08730
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
thew
Thermodesulfomicrobium sp. WS
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thew03032
]
TDMWS_05940 (gyrA)
03400 DNA repair and recombination proteins [BR:
thew03400
]
TDMWS_05940 (gyrA)
Enzymes [BR:
thew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TDMWS_05940 (gyrA)
DNA replication proteins [BR:
thew03032
]
Prokaryotic type
DNA Topoisomerases
TDMWS_05940 (gyrA)
DNA repair and recombination proteins [BR:
thew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TDMWS_05940 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HTH_37
Motif
Other DBs
NCBI-ProteinID:
BDV00509
LinkDB
All DBs
Position
complement(639351..641771)
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AA seq
806 aa
AA seq
DB search
MSQISIEKELQQAYLEYSLSVIIGRAIPDVRDGLKPVHRRILYAMHELGNTFNRPYKKSA
RVVGDVIGKYHPHGDAAVYDALVRMAQDFSMREPLVDGQGNFGSLDGDAPAAMRYTEVRM
AKLTSHFLADIDKDTVAFRPNYDNTLTEPEVLPTKVPNLLINGSSGIAVGMATNIPPHNL
GETIAATIHLLDNPEASIEELMVHLPGPDFPTGALLYGREGLREAYRTGRGSVRMRGRVE
VERRKGDLEAIVIREIPYGINKANLVERIAALVGERKIEGVADLRDESDRNGIRIVLDLK
RGTVAEVLINQLYKFTPLDTAFNINMLAVVGGRPKLLTLKDALAQFLAHRREVVLRRSRF
DLEKAQARAHILEGLRIALDFIDEVVALIRASASPAEAKTRLMERFGLSDAQAQAILDMR
LQRLTNLEREALVREYTEVLQRIEYLQSVINNPEVLRSVIREELAELRDTFATPRRSQFL
EHEPGSIDVEDIIPDEPVVITISQNGYIKRTSLEVYRQQRRGGTGVTGVQVAEEDFITTL
ITATTHQWINFFSNRGKMYQLKVHQLPEASRTSRGKHLANLLSLDDGEQIAAAMACREME
EGKFYFFYTRQGTVKRTATELYRNVRSQGLIALSMRPEDELVGVLEVAEDDEMILVSQNG
YSIRFPVAEVRAMGRAATGVRGMQLRSGDGVVAGVVVPREGTQELLTVSAGGYGKRTPLA
QFRAQSRGGMGIINMRITPRTGPVVGACLADPSDAIVLLTSAGKIIRISAEDISVLGRAT
QGVRLVRLEEGHVVVAFDLAPAESSA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaatcagtatcgaaaaagagctccagcaagcctatctggaatattccttgagc
gtcatcatcgggcgcgccatcccggatgtgcgcgacgggctcaagcccgtgcaccgacgc
atcctctacgccatgcacgagctgggcaataccttcaaccggccgtacaagaagtcggcc
cgcgtggtgggtgacgtcatcggtaaataccacccccatggggatgccgccgtgtacgac
gccttggtgcgcatggcccaggacttttccatgcgcgagcccttggtggacggtcagggg
aacttcggctccctggacggcgacgcccctgcggccatgcgctacaccgaagtgcgcatg
gccaagctcaccagccatttcctggcggatatcgacaaagacaccgtggccttccggccc
aactacgacaacaccctcaccgagccggaggtgcttcccaccaaggtgcccaacctgctc
atcaacgggtcttcgggcatcgccgtgggcatggccaccaatatcccgccccacaacctc
ggcgagaccattgccgccaccatccatcttctcgacaaccccgaggccagcatcgaggag
ctcatggtccacttgcccggcccggacttccccaccggggcgctgctgtacggccgcgaa
ggactgcgcgaggcctaccgcacgggccgcggcagcgtgcgcatgcggggccgggtggag
gtggaacgccgcaagggagatctggaagccatcgtcatccgcgagatcccctacgggatc
aacaaggcaaacctggtggagcgcatcgccgccctggtgggcgagcgcaagatcgaaggg
gtggcggatctgcgcgacgagtcggaccgcaacggcatccgcatcgtcctcgacctcaag
cgcggcaccgtggccgaggtcctcatcaaccagctctacaaattcacccccctggacacg
gccttcaacatcaacatgctcgccgtggtgggaggccgccccaaactcctcaccctcaaa
gacgccctggcccagtttttggcccaccgccgcgaagtcgtcctgcgccgctcgcgcttc
gatctggaaaaggcccaggcccgcgcccatatcctcgaaggtctgcgcatcgccctggac
ttcatcgacgaggtggtggccctcatccgcgcctcggcctcgccggcagaggccaagacc
cggctcatggaacgcttcggcctctccgacgcccaggcccaggccatcctcgacatgcgc
ctgcagcggctcaccaacctggagcgcgaagccttggtgcgcgaatataccgaggtgctc
cagcgcatcgagtatctccaaagcgtcatcaacaaccccgaggtactgcgctcggtgatc
cgcgaggagctcgcggagctgcgcgacaccttcgccaccccccgccgctcccaattcctg
gagcacgagccggggagcatcgacgtggaagacatcatccccgatgaaccggtggtcatc
accatctcccaaaacggctacatcaaacgcaccagcctcgaggtctaccgccagcagcgc
cgcggcggcaccggggtcaccggcgtgcaggtggcggaagaggacttcatcaccaccctg
atcaccgccaccacccaccaatggatcaacttcttctccaaccgcggcaagatgtaccag
ctcaaggtgcaccagctgccggaggccagccgcacgtcccgcggcaagcacctggcgaac
ctcctttccttggatgacggagagcagatcgccgccgccatggcctgccgcgagatggaa
gaaggaaaattctacttcttctacacccgccaaggcacggtgaaacggacggcgacagag
ctctaccgcaacgtccgctcccaggggctcatcgccctctccatgcggccggaagacgag
ctcgtgggcgtgctggaagtggcggaagacgacgagatgatcctcgtctcccaaaacggc
tactccatccgcttcccggtggccgaagtccgcgccatgggccgggcggccaccggcgtg
cgcggcatgcagctgcgctccggcgacggcgtggtggccggcgtggtggtgccccgggaa
gggacccaggagctgctcaccgtatcggcaggcggctacggcaaacgtacgccccttgcc
caattccgggcccagtcccgcggcggcatggggattatcaacatgcgcatcacgccgcgc
accggcccggtggtgggcgcctgcctcgcggatcccagcgacgccatcgtgctcctgacc
tctgcaggcaagatcatccgcatcagcgccgaggacatctccgtgctcggccgcgccacc
caaggggtgcgcctggtgcgtttggaagaagggcacgtggtggtggccttcgacctggct
cccgccgaatccagcgcctaa
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