Thermodesulfomicrobium sp. WS: TDMWS_07020
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Entry
TDMWS_07020 CDS
T08730
Name
(GenBank) HDIG domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
thew
Thermodesulfomicrobium sp. WS
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thew03019
]
TDMWS_07020
Messenger RNA biogenesis [BR:
thew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TDMWS_07020
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
BDV00617
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All DBs
Position
complement(761067..762071)
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AA seq
334 aa
AA seq
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MTMKQTYLSDLTPGDPVADLFAVTAAQRREAKNGPYWQITLMDKSGQMEARIWAPTSQAV
TDVPRGTIARVEGTVTRYNGQTQINVSSFLLVDPASVELADFMTTSATPAAELLAQLEAL
LDAGLTYTPWRTLCSLVLTDPEIRTALIQAPGAKKVHHAYVGGLLEHTLAVMRLTQAIAA
LYPEADQEILLVATLFHDLGKAFEIRTGLEREYTDAGRLVGHLILGMEILDRFLAQVPEL
PEGLALHLRHLVVSHHGQPEFGTPREPMTVEAFILHFADNLDAKIATTRAALAGSPPLSW
SERIPALGRAVFEPLRTPRPASAATAPANDKAQA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaagcaaacctatctcagcgaccttaccccaggcgacccagtggcggatctc
ttcgccgtcaccgccgcccaacgccgggaggccaaaaacggcccctattggcagattacc
ctcatggacaaaagcggccagatggaggcccgcatctgggcgcctaccagccaggccgtt
acggacgtgccccgcgggaccatcgccagggtggagggcacggtcaccaggtacaacggc
cagacgcaaatcaatgtcagctcgttcctgctcgtggacccagcctccgtggaacttgcg
gacttcatgaccaccagcgccaccccggctgcagagcttctcgcccagctggaagcgctc
ctggatgccggcctcacctacaccccgtggcgcaccctctgctccttggtgctcacggac
ccggaaatccgtacggcgctgattcaggccccaggggccaaaaaagtacaccacgcctac
gtcggggggcttctggagcacaccctggcggtcatgcgccttacccaagccatcgccgcc
ctctaccctgaggcggaccaagagattctgctggtggccaccctcttccacgacctgggc
aaggcctttgagatccgcacgggcctggagcgagagtacaccgatgccggccggctcgtc
ggacacctgattttggggatggagatcctcgaccgcttcctcgcccaggtacccgaactc
cctgaaggccttgccctgcatctgcggcacctggtggtgagccaccacggacagccggaa
ttcggcactccccgagagcccatgaccgtggaggccttcatcctccactttgccgacaac
ctggatgccaaaatcgccaccacccgggcggccctggcaggctcccccccattgtcctgg
tcggagcgcatcccggcgctgggccgggccgtgttcgagcccctgcgcaccccgcgccct
gcatccgccgctaccgcgcctgcgaacgacaaggcacaggcataa
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