Thermodesulfomicrobium sp. WS: TDMWS_08070
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Entry
TDMWS_08070 CDS
T08730
Symbol
nifA-2
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TDMWS_08070 (nifA-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thew03000
]
TDMWS_08070 (nifA-2)
Transcription factors [BR:
thew03000
]
Prokaryotic type
Helix-turn-helix
Other families
TDMWS_08070 (nifA-2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
AAA
AAA_16
Mg_chelatase
AAA_22
AAA_2
GAF_3
AAA_25
AAA_19
AAA_7
ATPase
Torsin
nSTAND3
HTH_28
ABC_tran
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BDV00722
LinkDB
All DBs
Position
complement(867098..868669)
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AA seq
523 aa
AA seq
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MDANQDLDVLLRIATHIDQAMDLGNTLEAVLETLATTLGLLRITITLYDERTRRLAISRS
HGLTPEERQRGIYRLDEGVTGAIFRQRQAFVVPDITTEPLFLDKTGSRRPQDIPLAFIGV
PILLHGEPIGVLSADRAYPDPERLEADARTLSIVATLLSRILALHKNVQKKLHTLEQENL
RLRSQLSRETGGPSLIGKSSRLREVEDMIERVAPTRATVLLLGESGTGKTLVARIIHDLS
DRAQRPFVKVNCAAIPENLLESELFGHEKGAFTGATASRPGRFEEAHGGTIFLDEIGELP
LPLQSKLLRVLQEREMERLGSNATRKVDVRIISATNRDLEELVRAGQFRNDLFYRINVFP
IHVPALRERPEDILPLLAHFQHRAEQEYGRSLSFTAEALHLLEGYFWPGNVREMENLVER
LIILNDGTPVTAARLRPLLRLAPEQVVSSPAPSPTPGSLQEMEQRELLAALERCHWIQQQ
AARELGITPRQLGYRLRKYGLETFVARKRLEAIASRGGEHVDR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaccaagacctcgatgtgcttctgcgcatcgccacccacatcgaccaggcc
atggatctgggaaacaccctggaggcggtcctggaaaccctggcgaccaccttggggctt
ttgcgtatcaccatcaccctctacgatgagcgcactcgccgtctcgccatttcccgatcc
cacggtctcaccccagaagaacgccaacggggcatctaccgcctcgacgaaggcgttacc
ggcgccatctttcgccagcgccaagccttcgtggtaccggacatcaccaccgaaccgctg
tttttagacaagaccggatcccggcggccccaggacatccctctcgccttcattggagtc
cccatcctcctgcatggcgagcccataggagtcctgagtgcggaccgagcctaccccgac
ccggaacgcctggaggccgacgcccgcaccctttccatcgtcgccaccctcctttcccgc
atccttgctcttcacaaaaatgtacaaaaaaagctccacactctcgagcaagaaaatctc
cggctgcgctctcaactgtcccgagagaccggaggtccaagcctcatcggcaagagctcc
cgtctgcgtgaggtcgaagacatgatcgagcgcgtagcccccacgcgggccacagtgctc
ctcttaggagaatccggcacgggaaaaaccctcgtggcgcgcatcatccatgatctctcg
gatcgagcccaacggccgttcgtcaaggtgaattgcgccgccatcccggagaacctcttg
gaatcggaactcttcgggcacgagaaaggggcttttaccggcgccacggcatcccgaccg
gggcgatttgaggaagcccacggagggaccatctttctggacgaaattggagaactcccg
ctgccactgcaatccaagctgctgcgcgtcctccaggagcgagagatggagcgtctcggg
agtaatgctacccgcaaggtggatgtccgtatcatcagcgccaccaaccgcgacttggaa
gaattggtccgcgccggccagtttcgcaacgacctcttctaccgcatcaacgtcttcccc
atccacgtgcccgccttgcgcgaacgcccggaagacatcctgcccctgcttgcccatttc
cagcaccgggcagagcaagaatatggacggtctctgtccttcacggccgaagccctccac
ctcctcgaaggctacttctggccagggaacgtgcgggagatggaaaacctcgtggagcgg
ctgatcatcctcaatgacggcaccccggtgacggcagcacgcctgcggccattgctccgc
ctcgccccagagcaagtggtttccagtccggctccttcccccacgccgggttcgctccag
gagatggagcagcgggaactcttggccgccttggaacgctgccattggattcagcagcag
gcagcccgagaactcgggatcacgcccaggcagctgggatatcgcctgcgcaaatatggt
ctggaaacgttcgtggcccgcaagcggctcgaagccattgcctcacggggcggggaacac
gtggatcgctga
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