Thermodesulfomicrobium sp. WS: TDMWS_08430
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Entry
TDMWS_08430 CDS
T08730
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew00260
Glycine, serine and threonine metabolism
thew00460
Cyanoamino acid metabolism
thew00630
Glyoxylate and dicarboxylate metabolism
thew00670
One carbon pool by folate
thew00680
Methane metabolism
thew01100
Metabolic pathways
thew01110
Biosynthesis of secondary metabolites
thew01120
Microbial metabolism in diverse environments
thew01200
Carbon metabolism
thew01230
Biosynthesis of amino acids
thew01240
Biosynthesis of cofactors
thew04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TDMWS_08430 (glyA)
09102 Energy metabolism
00680 Methane metabolism
TDMWS_08430 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TDMWS_08430 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TDMWS_08430 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TDMWS_08430 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TDMWS_08430 (glyA)
Enzymes [BR:
thew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TDMWS_08430 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Phage_Nu1
Motif
Other DBs
NCBI-ProteinID:
BDV00758
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Position
complement(903098..904336)
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AA seq
412 aa
AA seq
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MDELLRQDPQIAKAIELETTRQLTKLELIASENFTSAAVRQAMGSVMTHKYAEGYPGKRY
YGGCEFVDMAEDMAIDRAKRLFHAGYANVQPHSGSQANMAAYFALMSPGDTLLGMNLAHG
GHLTHGSPVNFSGKLYKIVAYGVRQDTGCIDYDEVERLALEHQPKVIVAGASAYPRTIDF
ARFRAIADACGAALVVDMAHIAGLVAAGLHPSPIPYAHVTTTTTHKTLRGPRGGMILAAE
DLGKTLNSQIFPGIQGGPLMHVIAAKAVAFLEALQPSFVDYQRQVIANAQTLAQELVNAG
FDLVSGGTDNHLMLVDLTRKGITGKDAEHALDRAGITVNKNAVPFDTRSPFVTSGIRIGT
PALTTRGMKEAEMRQVATWIVEVLENMDNDSRLEAIRRQVERFAREFPLFAW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactcttgcgtcaggacccccaaatcgccaaggccattgagctggagaccacc
cgccagctcaccaagctcgaactcatcgcctcggaaaacttcacctccgctgccgtgcgt
caggccatgggcagcgtcatgacccataagtacgcggaaggctatcccggcaagcgctac
tacggcggctgcgagttcgtggacatggccgaagacatggccatcgaccgagccaaacgg
ctctttcacgccggctacgccaacgtccagccccactccggctcccaggccaacatggcc
gcctattttgccctcatgagtccgggggataccctgctcggcatgaatctcgcccacggc
gggcacctcacccacggcagtccggtgaacttctccggcaagctctacaagatcgtggcc
tacggcgtgcgccaggacaccggctgcatcgactacgacgaagtggaacgtctggcccta
gagcaccaacccaaggtcatcgtggccggggccagtgcctacccgcgcaccatcgacttt
gcccgcttccgcgccattgccgatgcctgcggcgcggccctggtggtggacatggcccat
atcgccggcctggtggccgcagggctgcacccctcgcccatcccctacgcccacgtcacc
accaccaccacccacaagaccctgcgcggcccccgcggcggcatgatcctcgccgccgaa
gacctcgggaagaccctcaattcccagatcttccccggcattcaaggcggccccctcatg
cacgtcatcgcggccaaggcggtggccttcctggaagccctgcagcccagcttcgtggac
taccagcgccaggtcatcgccaatgcccaaaccctggcccaggaactggtgaatgccggc
tttgacctggtctccggcggcacggacaaccacctcatgctggtggacctcacccgcaag
gggatcaccggcaaagacgccgagcatgccttggatcgcgccggcatcacggtcaacaag
aacgccgtgcccttcgacacccgctcgcccttcgtgacctcgggcattcgcatcggcacg
cctgcgctcaccacccgcggcatgaaagaggccgagatgcgccaagtggccacgtggatc
gtggaggtattggaaaacatggacaacgactcccggctcgaagccatccgccgtcaggtg
gaacgcttcgcccgtgagttcccgctctttgcctggtaa
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