KEGG   Thermodesulfomicrobium sp. WS: TDMWS_09080
Entry
TDMWS_09080       CDS       T08730                                 
Symbol
lpdA
Name
(GenBank) 2-oxoglutarate dehydrogenase E3
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
thew  Thermodesulfomicrobium sp. WS
Pathway
thew00010  Glycolysis / Gluconeogenesis
thew00020  Citrate cycle (TCA cycle)
thew00260  Glycine, serine and threonine metabolism
thew00280  Valine, leucine and isoleucine degradation
thew00620  Pyruvate metabolism
thew00630  Glyoxylate and dicarboxylate metabolism
thew00640  Propanoate metabolism
thew00670  One carbon pool by folate
thew00785  Lipoic acid metabolism
thew01100  Metabolic pathways
thew01110  Biosynthesis of secondary metabolites
thew01120  Microbial metabolism in diverse environments
thew01200  Carbon metabolism
thew01210  2-Oxocarboxylic acid metabolism
thew01240  Biosynthesis of cofactors
Module
thew_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
thew_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:thew00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    TDMWS_09080 (lpdA)
   00020 Citrate cycle (TCA cycle)
    TDMWS_09080 (lpdA)
   00620 Pyruvate metabolism
    TDMWS_09080 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    TDMWS_09080 (lpdA)
   00640 Propanoate metabolism
    TDMWS_09080 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TDMWS_09080 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    TDMWS_09080 (lpdA)
   00310 Lysine degradation
    TDMWS_09080 (lpdA)
   00380 Tryptophan metabolism
    TDMWS_09080 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    TDMWS_09080 (lpdA)
   00670 One carbon pool by folate
    TDMWS_09080 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:thew04147]
    TDMWS_09080 (lpdA)
Enzymes [BR:thew01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     TDMWS_09080 (lpdA)
Exosome [BR:thew04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   TDMWS_09080 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox Pyr_redox_3 GIDA Pyr_redox_dim HI0933_like FAD_oxidored DAO FAD_binding_2 Lycopene_cycl NAD_binding_8 FAD_binding_3 AlaDh_PNT_C 3HCDH_N Lys_Orn_oxgnase XdhC_C Thi4
Other DBs
NCBI-ProteinID: BDV00823
LinkDB
Position
complement(976568..977923)
AA seq 451 aa
MTQLHADMVILGAGPAGYAAALAASQRGKATVLVAAGPLGGTCLNWGCIPTKIYLGASEP
LEGLRTMGRLRLVQGEAALDLAALRRRVQTIVQATHKAMTTALEGGKVQVIHGRGRIIAP
HTVTVPEKDISIQAPIILVATGSRPMPLPGVPFGGPILDSTEVLELSQAPQSLAIIGGGA
IGVEMAQFWNRVGTAVTLVEAAPTLVPSEDPALGQALASMLKRSGITVHTNAPVQEVLVD
GANVHVRLPEATCTAQAVLVAIGRRPNTEDLGLEAAGAQVDGRGFVITDAQLRAAPGVYA
IGDVNGRTLLAHAAEHQAHFAVAHALGATQGAYTPGPIPACVYGGAELVRVGPAYAELKT
HDVLVSRAMLAANPMAQAHGHVHGMVQVYWRHGQVVGVAAVGARVSHLAGLAEAMVRDGW
DESAAHTHIFAHPSLDEAVRAALTAPKEPLP
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgacccagttgcatgccgatatggtcatcctgggcgcagggccggccggttatgccgca
gctcttgccgccagtcaaagaggaaaagccaccgtgctcgtggcagccggccccctgggc
ggcacctgcctcaattgggggtgcatccccaccaagatctatcttggcgccagcgaaccc
ctggaggggctgcgcaccatggggcgtctgcgtctcgtgcagggcgaggccgccctggac
cttgccgccctgcgccgccgcgttcagaccatcgttcaggccacccacaaggccatgact
acggctttggagggcggcaaagtacaggtgatccacggccgcggccgcatcatcgccccg
cacacggtcacggtgccggaaaaggacatcagcatccaggcgcccatcatcctcgtggcc
accggctcccgccccatgccccttccaggcgtccccttcggcggcccgatcctcgactcc
acggaggtcctcgaactctcccaagccccccagagccttgccatcatcggcgggggggcc
attggcgtggagatggcgcaattctggaaccgcgtgggcacggccgtcaccctggtggag
gcggcccccaccctggtccccagtgaagaccccgcccttggccaggcgcttgcctccatg
ctcaagcgcagcggcatcacagtccacaccaacgctccggtgcaggaagtccttgtggac
ggggccaacgtccatgtccgcctgccggaggccacctgcacggcccaggcagtgctcgtg
gccatcggtcggcgtcccaacactgaagacctgggccttgaggctgccggggcgcaggtg
gatggccgcggcttcgtcatcaccgacgcccaactccgggcggcccctggcgtctacgcc
atcggcgacgtcaatggccgcacgctgctcgcccacgccgccgaacaccaggcccacttt
gccgtggcccacgcactcggagcaacccagggggcctatacccctggccccatccccgcc
tgtgtgtacggcggcgcggaactggtgcgcgtggggcccgcgtatgccgaactcaagacg
cacgatgtgctcgtctcccgcgccatgctcgcggccaaccccatggcccaggcccatggg
catgtgcacggcatggtgcaggtgtactggcgccatgggcaggtcgtgggggtggcggcg
gtcggggcacgggtctcgcatcttgcgggcctggccgaagccatggtgcgggacggatgg
gacgaatcggcggcgcacacccatatcttcgcccatccgagcctcgatgaggccgtacgc
gccgcccttaccgcgcccaaggagccgctcccatga

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