Thermodesulfomicrobium sp. WS: TDMWS_09270
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Entry
TDMWS_09270 CDS
T08730
Symbol
cobB-1
Name
(GenBank) cobyrinate a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew00860
Porphyrin metabolism
thew01100
Metabolic pathways
thew01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
TDMWS_09270 (cobB-1)
Enzymes [BR:
thew01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
TDMWS_09270 (cobB-1)
6.3.5.11 cobyrinate a,c-diamide synthase
TDMWS_09270 (cobB-1)
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Motif
Pfam:
GATase_3
AAA_26
CbiA
DUF1611
Phage_phiJL001_Gp84_N
SNO
Motif
Other DBs
NCBI-ProteinID:
BDV00842
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Position
995448..996875
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AA seq
475 aa
AA seq
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MSEALSCPRLLVAGLGGGSGKTMVSLGLARALREDGLIVQTFKKGPDYIDAQWLSLASGQ
PTSNLDPFLLSPTQLRQVVAARAAGKDLLLVEGNRGLFDGKDVQGSCSSAELARLLQCPV
VVVLDCTKVTRTMAAVVLGLVHFDPQLAIGGVILNRTAGCRHRTIVRQSIETYTGVPVLG
ELPKLKDNPIPERHMGLTSHAEWGTDVLAAVAARVREHVDIAACLRLARSAPHLPLSFQE
AAPLFVPRAPRGVRIGVALDAALWFYYQENIDALQAAGAEVVPFSLLRDPELPPMHALYL
GGGFPETLAQGLSANVSMRESVRRAVERGMPVYAECGGLMYLGRELHFQGQTFPMSGALP
FATTVCSRPQGHGYVAATVTAPSPFFAPGTQLLGHEFHYSCCTDLPGDANLVLQLDPGVG
MAAGRDGLVWRNVFASYTHIHAVGVPAWAEAMVEAAMAFAACPSGGRLENLRRGT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcattgtcctgccctcggctgctcgtcgccggtttgggcggcgggtccggc
aagacaatggtgagtttaggcctggctcgcgccctgcgtgaagatggcctgatcgtccag
accttcaagaagggtccagattatatcgatgctcaatggctctcgttggccagtgggcag
ccgacatccaatctggacccttttttactctcccccacccaactgcgccaggtggtggcg
gcgcgggcagcaggcaaagatttgcttctcgtggagggcaatcgcggcctctttgacggt
aaagacgtccagggttcctgctcgtcggcggagctggcgcggctcctccaatgtccggtg
gtggtggtgctcgattgcaccaaggtgacccgcaccatggccgcggtggtcttgggtttg
gtgcattttgatccccagcttgccatcggcggggtgatcctcaaccgtaccgccgggtgt
cggcatcggaccatcgtccgtcaaagcatcgagacctataccggtgtgccggtgctcgga
gaacttcccaaactcaaggacaaccccattccggagcggcacatggggcttacctcccat
gccgagtggggcacggacgtccttgctgcggtggcggccagagtgcgggagcacgtggac
attgccgcctgcctgcgtttggcccgatccgcaccgcatcttccgttgtcgttccaagaa
gctgcgccgctttttgtgcctcgcgcgccccgtggggtgcgtatcggtgtggccttggac
gctgccctgtggttttactatcaggaaaatatcgatgccttgcaggccgcaggggcggaa
gtcgtgccgtttagtctgttgcgcgacccggagcttccgcccatgcatgcgctctatctg
ggtggaggttttccggagaccttggcccaagggctgtccgccaacgtctccatgcgcgag
agcgtgcgccgggccgtggagcggggcatgccggtgtatgctgaatgcggcggcctcatg
tacttgggccgggaactgcattttcaagggcagacattccccatgagtggagcgcttcct
tttgccactaccgtgtgctcgcggccgcaggggcatggatatgtggccgccaccgtgacc
gctccatcgccgttttttgcgcctggcacacagttgctcggccacgaatttcattactct
tgctgcacggatctgcccggggatgccaacctggtcctccagcttgatcccggtgtgggc
atggccgccggccgcgatggcctggtgtggcgcaatgtttttgcgtcgtatacccacatc
catgccgtgggcgtgcctgcatgggcagaggccatggtggaggctgccatggcttttgcg
gcgtgcccgtccggaggtcgcttggagaatttgcggcgggggacttga
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