Thermodesulfomicrobium sp. WS: TDMWS_09420
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Entry
TDMWS_09420 CDS
T08730
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew00900
Terpenoid backbone biosynthesis
thew01100
Metabolic pathways
thew01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
TDMWS_09420
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
thew01006
]
TDMWS_09420
Enzymes [BR:
thew01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
TDMWS_09420
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
TDMWS_09420
2.5.1.29 geranylgeranyl diphosphate synthase
TDMWS_09420
Prenyltransferases [BR:
thew01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
TDMWS_09420
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDV00857
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All DBs
Position
1011791..1012672
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AA seq
293 aa
AA seq
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MDAAALKEALRQRARLVENRLVTLFADGAVPGRLREAMEYSLCAGGKRLRPALVLAWAEL
EGLAASDVLDFACALECIHTYSLIHDDLPAMDNDDLRRGKPSCHKQFDEATAILAGDGLL
TEAFLVMARTPLEASRVLAAVSIVAEAAGPRGMVGGQMLDMELTGKRADLSALQSMHRKK
TGALIAAACVAGALLAGGDTERAQCYGHHLGLAFQITDDILDVVGDTSTLGKPVGSDERQ
GKSTYPAVLGMEQSRALAQQSIDQAVAALAPYGDHPQAVFLRRLAQYLMERSQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgctgccctgaaggaggccctgcggcagcgggcgcggctggtggaaaaccga
ttggtcacgctgtttgcggacggcgcagtgcctgggcgcctgcgcgaggccatggagtat
tcgctttgtgccggcggcaagcgtctgcggccggccttggtgctggcctgggcggagctc
gaagggctggcggcttcggatgtgctcgacttcgcctgcgccctggagtgcatccacacc
tattctctgattcacgatgacttacccgccatggacaacgacgacctgcgccggggcaaa
ccctcctgccacaagcagttcgacgaggctacagccattttggcgggcgacggcctgctc
acggaggcctttttggtgatggcccgaacgccgctggaggcatctcgggtgctggctgcc
gtgagtatcgtggctgaggcggcaggtcctcgcggcatggtgggcggccagatgctggac
atggaactcaccggcaagcgtgccgacctgtccgccctccagtccatgcaccgcaaaaag
accggggcgctcatcgccgcagcgtgcgtggcgggcgcgctgcttgccgggggcgatacg
gagcgggcccaatgctacggtcaccatctgggccttgcgtttcagatcaccgatgacatc
ctcgacgtggtgggagatacctccaccttgggcaaacccgtcggcagtgacgagcgccag
ggcaaaagcacctatcccgcggtgctgggcatggagcagagccgcgccttggcgcagcag
agcatcgaccaggcagtggccgcccttgccccctatggcgaccatccccaggcggtgttt
ttgcgccgtcttgcccagtacctcatggagcggagccaatga
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