Thermodesulfomicrobium sp. WS: TDMWS_09830
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Entry
TDMWS_09830 CDS
T08730
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew00470
D-Amino acid metabolism
thew00550
Peptidoglycan biosynthesis
thew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TDMWS_09830 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TDMWS_09830 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thew01011
]
TDMWS_09830 (murD)
Enzymes [BR:
thew01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
TDMWS_09830 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
thew01011
]
Precursor biosynthesis
Amino acid ligase
TDMWS_09830 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
TrkA_N
KARI_N
AdoHcyase_NAD
NAD_binding_8
Pyr_redox
F420_oxidored
Pyr_redox_2
3HCDH_N
FAD_binding_3
XdhC_C
NAD_binding_2
CreD
NAD_binding_7
Pyr_redox_3
Oxidored_nitro
HI0933_like
GIDA
STAS_2
Motif
Other DBs
NCBI-ProteinID:
BDV00898
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Position
1053321..1054610
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AA seq
429 aa
AA seq
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MRAMIHSDQLRGHQVAVVGAGRSGMAAARLLRALGAEVQVHDVRPEGLAEAAAQGFSVRA
GEHRAEDFAPCSMVVLSPGIPRARIAPLLAPGTTLIGELELGSWFVAEPMVAVTGSNGKT
TTTSVIGHVLKSTGRRVFVGGNIGTPLCEYVLSGDLADVVVLEVSSFQLQTVNAFHPRVG
VLLNISPNHLDYHADMDEYRAAKMQLFARMTEADLAVLPLSLKEDVERQGQVRARRVYVT
AVQRFSCPGLPGAHNQANLEAAFHACRFFGVDEAAFAAAVKDFQGLPHRQEVVFEKDGVR
FVDDSKATTLESLAAALRAQDRPVRLLAGGVFKGGDPAELAPLIREHCRSIHLFGQSREV
FAAAWEHLGLPLSWHPTLEEAVAEAVRMAVPGETVLLSPATASFDLFANYKERGAVFAAA
ARRAMGVAG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcaatgatccactccgaccaattgcgtggacaccaggtggcggtggtgggcgcc
gggcgctcgggcatggcggcggcgcggctgctgcgcgccttgggcgccgaggtgcaggtg
catgacgtgcgccccgaggggcttgcggaggctgcggcgcaagggttttccgtgcgcgcg
ggcgaacaccgggcagaggattttgccccgtgttcgatggtggtgctcagcccagggatc
ccgcgggcgcgcatcgccccgctgctggccccaggcacgaccctcattggtgagctggag
ctgggcagctggttcgtggccgagcccatggtggcggtgaccggctccaacggcaaaacc
accaccacttccgtgatcggccatgtcttgaagagcacgggccgcagggtctttgtgggc
ggcaatatcggcacgccgctgtgcgagtacgtgctttccggggacctggcggacgttgtg
gtgctggaagtctccagttttcagctccagaccgtcaatgccttccatccgcgcgtgggg
gtgctgctcaatatctctcccaaccatttggattaccacgccgacatggacgaataccgc
gccgccaagatgcagcttttcgcccgcatgaccgaggcggacctggcggtgcttccgttg
agcctcaaagaggatgtggaacgccagggacaggtgcgggcgcggcgggtatatgtcacg
gccgtgcagcgcttctcctgccccgggcttcctggggcgcacaaccaagccaacctggag
gccgcgtttcatgcctgccgctttttcggcgtggacgaggcggcctttgccgcagcggtc
aaggattttcaggggcttccccaccgccaggaagtggtgttcgaaaaggacggggtgcgt
tttgtggatgattccaaggccaccacgctcgaatctctggcagcggccttgcgcgcccaa
gatcggccggtacggctcttggcgggaggggtgttcaagggcggggatcctgcagagctc
gccccgttgatccgggagcactgccgcagcattcatttgtttggccaaagccgggaggtg
tttgccgcagcctgggaacatttggggctgcccctttcctggcaccccaccctggaggag
gccgtggccgaggctgtgcgcatggctgtccccggagagacggtgctcctctctccagcc
acggcgagcttcgacctttttgccaactacaaggaacgtggtgcggtctttgccgcagct
gcccgccgcgccatgggggttgcgggatga
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