Thermodesulfomicrobium sp. WS: TDMWS_11720
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Entry
TDMWS_11720 CDS
T08730
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
thew
Thermodesulfomicrobium sp. WS
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thew03009
]
TDMWS_11720
Ribosome biogenesis [BR:
thew03009
]
Prokaryotic type
ribosomal protein modification factors
TDMWS_11720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
TPR_2
TPR_1
TPR_16
TPR_8
TPR_12
TPR_19
TPR_9
TPR_14
TPR_11
ANAPC3
ARM_TT21_C
TPR_Slam
TPR_CcmH_CycH
RMD1-3
Iml2-TPR_39
CFAP70_TPR_C
TP_0391_C
Y4kD_C
Coatomer_E
HrpB1_HrpK
ARM_TT21_N
Motif
Other DBs
NCBI-ProteinID:
BDV01087
LinkDB
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Position
complement(1259712..1261430)
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AA seq
572 aa
AA seq
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MIQLRPCPKGFTTDLDKTRDPAQTVAEVRAALAQSGLHVLAETRRVDTGRLGIPVYMSVC
GEHARKIMPTRKQMGKGSSPAQAEASALMELVERFSFFSFWEDADVPSLTWSEAEARFGK
DLIPVEWILHSVADPASAQSARAALDLVPWRFAEATDLAGERPLWVPITWFKKLNEFNGS
CAGNSMEEAILQGVCELVERHVCCLWDRTRPQTPTIDPQSATDPVLRELLAKFAAAGVRV
WLKDFSLGMPVPTVAALAYDPATFPLQSEIVFTAGTASSPEKAAIRALTEVAQLAGDFIT
ESNYEASGLPKFFRLEDTAWVEAGPLVSIHTLPNIAHDDITEELRTLARGLAQLGHPPLA
VATTHARLGIPTAYTFAPGLLFRERTPRASVGLFVGRVLAEEVDPEAAKAGLQTLESLWP
DAPYLPFFHGLVALRQGDLPRAAQLFAQAEPLQEDADDRGLAAFYQAYALTQEGHWSEAI
PILDRAIDACPEVKEYYNLRGVAYFKESQYAAAAANFELALELDSGSVMDLANLGVCHKL
LGHTTLARQILTRALTIDPSLDFVRQHLTELP
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcttcgcccctgccccaaaggcttcaccactgacctggacaagacccgcgac
ccggcccagaccgtggccgaggtccgcgccgccctggcccagagcggtctgcacgtcctg
gccgaaacccgccgtgtggacaccggacgcttggggatccctgtgtacatgtccgtctgc
ggcgagcatgcccgaaagatcatgcccacccgcaaacagatgggcaaaggctcctcgccc
gcacaggccgaagcctcggccctcatggagctcgtggagcgcttcagctttttcagtttc
tgggaagacgccgacgtgcccagcctcacctggtccgaagccgaagcccgcttcggcaaa
gacctcatccctgtggaatggatcctccattccgtggccgaccccgcctcagcgcaatcg
gcacgcgctgcgttggacctggtgccctggcgctttgccgaggcaacggacctcgccggc
gagcgtccgctgtgggtgcccatcacctggttcaagaagctcaatgagttcaacggctcc
tgcgcgggcaactccatggaagaagcgatccttcagggagtgtgcgaactggtggaacgc
cacgtgtgctgcctgtgggaccgtacccgcccgcaaacgcccaccatcgacccccaaagc
gccacggatccggttctgcgggagctgctcgccaagttcgccgctgccggagtccgggtc
tggctcaaggacttttccctgggcatgcccgtacccaccgtggcggccctggcctacgat
ccggcaacctttccactccaaagcgagatcgtctttaccgccggtactgccagctccccc
gaaaaggccgccatccgggcgctcacggaagtggcgcagctggcgggggatttcatcact
gaaagcaactacgaggcctcggggctgcccaagttcttccgtctggaagacaccgcctgg
gtggaagcaggccccctggtctccatccacaccctgcccaatatcgcgcacgacgacatc
accgaggaactgcgcaccctggcgcgcgggctcgcccagctcggccatcctcccctggcc
gtggccaccacccatgcgcgcctgggcattcccacggcctatacctttgccccgggactg
ctctttcgcgagcgcaccccccgggcgtcggtagggcttttcgtgggccgggtcttggcc
gaggaagtggatcccgaggccgccaaggccggacttcagaccctggaatccttgtggccg
gatgcgccgtacctgccctttttccacggcctcgtggcgttgcggcaaggagatcttccc
cgggcggcccagctcttcgcccaggccgaacccctgcaggaagacgccgacgaccgggga
cttgccgccttctaccaggcctacgccctcacccaggaagggcattggagcgaggccatc
cccatcctggaccgggccatcgacgcgtgccctgaagtcaaggaatactacaacctgcgc
ggcgtggcctacttcaaagagagccagtacgccgcggcagcggccaatttcgagctggcc
ctggagctcgacagcggctcggtcatggacctggccaatctcggcgtctgccacaaactt
ctcggccatacgacccttgcccggcaaatccttacccgagcgctcaccatcgaccccagc
ctggactttgtccgccagcacctcacggaactcccctga
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