Thermodesulfomicrobium sp. WS: TDMWS_13080
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Entry
TDMWS_13080 CDS
T08730
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
thew
Thermodesulfomicrobium sp. WS
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thew03032
]
TDMWS_13080
03036 Chromosome and associated proteins [BR:
thew03036
]
TDMWS_13080
03400 DNA repair and recombination proteins [BR:
thew03400
]
TDMWS_13080
DNA replication proteins [BR:
thew03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TDMWS_13080
Chromosome and associated proteins [BR:
thew03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
TDMWS_13080
DNA repair and recombination proteins [BR:
thew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
TDMWS_13080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
DUF2267
DUF6074
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BDV01223
LinkDB
All DBs
Position
complement(1402588..1402866)
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AA seq
92 aa
AA seq
DB search
MNKSDLIQALAERAGITHDEATMTVETFFEAVREAMLRGDRVELRGFGSFKIKHYDGYTG
RNPKTGETVEVRPKRLPFFKAGKGLVDAVNDR
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagcgatctcatccaagccctggcggagcgcgcgggtattacccatgacgag
gccaccatgactgtggaaaccttttttgaggctgtgcgcgaggctatgctccgcggcgac
cgtgtagagctccgggggtttggcagcttcaagatcaagcactacgacggttacacgggc
cgcaatcccaaaaccggcgagaccgtggaagtacgacccaagcgactgcccttcttcaag
gcaggcaaagggctcgtggatgcagtcaacgaccgatga
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