Thermodesulfomicrobium sp. WS: TDMWS_14500
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Entry
TDMWS_14500 CDS
T08730
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
thew
Thermodesulfomicrobium sp. WS
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thew03021
]
TDMWS_14500
Transcription machinery [BR:
thew03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TDMWS_14500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_6
HTH_28
GntR
KORA
Motif
Other DBs
NCBI-ProteinID:
BDV01365
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All DBs
Position
1568957..1569991
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AA seq
344 aa
AA seq
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MSTQVTEPEIVEIADPEILVDSLVEESIEDTDAMEEHTDPFPQGELALLSPSALVPRDRA
LDPLALYLQEIKKFQPLTPEEEFELARRYRDEHDEKAAFTLITANLRLVVRIAMDFQRRW
MKNVLDLIQEGNIGLIKAVQKFDPDKGIKFSYYAAFWIKAYILKFIMDNWRMVKIGTTQA
QRKLFYNLSKERQRLQSLGYDPDTSTMAKNLQVSEADIVEMGQRLGQNDLSLDMQVGDDS
DSTPLDFIPALEAHVEDRMASEEMSELLLHNIEALKAELNDKERDILESRLLAETPVTLR
EIGEKYGITRERVRQIEARLLQKIKERMQQTIHDFSEEWIHESR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaggtcaccgagcccgaaatcgtcgaaatcgccgacccggaaatcctcgtg
gactccttggtggaagaatccatcgaggacaccgatgccatggaggagcacacggacccg
tttccccagggagagcttgcgctgctttccccaagtgctctcgtgccccgggatcgcgcc
cttgatccgctggcgctctacctgcaagaaatcaaaaagttccagccactcactccggaa
gaagaattcgaactcgcccggcgctaccgcgacgaacacgacgaaaaagccgccttcacc
ctcatcaccgccaatctccggctggtggtgcgcattgccatggactttcagcgccgctgg
atgaaaaacgtcctcgacctcatccaggagggcaacatcgggctcatcaaggccgtgcaa
aaattcgatcccgacaagggcatcaagttttcctactacgccgctttttggatcaaggcg
tacattctcaagttcatcatggacaattggcgcatggtcaaaattggcaccacccaggcc
cagcgcaagttgttctataatttgagcaaagagcggcagcgcctccaatccctgggctat
gaccccgacaccagcaccatggccaaaaacctccaggtctcggaagcggacatcgtggaa
atgggccaacggctcggacaaaacgacctctccttggacatgcaggtcggcgacgactcc
gactccaccccgctggacttcatccccgccctggaagcccacgtggaagaccgcatggcc
agtgaggaaatgagcgagctcttgctgcacaacatcgaagcgctcaaggcagagctcaac
gacaaggagcgggacatcctcgaatcgcggctgctggcagaaacaccggtaacccttcgg
gaaatcggtgaaaaatacggaatcacccgggaacgggtgcgacaaatcgaggcccgtttg
ctgcaaaagatcaaagaacgcatgcagcagaccatccacgatttttccgaagagtggatc
catgaatcgcgatga
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