Thermodesulfomicrobium sp. WS: TDMWS_14880
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Entry
TDMWS_14880 CDS
T08730
Symbol
nifA-1
Name
(GenBank) hypothetical protein
KO
K02584
Nif-specific regulatory protein
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TDMWS_14880 (nifA-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thew03000
]
TDMWS_14880 (nifA-1)
Transcription factors [BR:
thew03000
]
Prokaryotic type
Helix-turn-helix
Other families
TDMWS_14880 (nifA-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
Mg_chelatase
AAA_5
AAA_3
AAA
AAA_2
GAF_3
AAA_16
DUF2089
Parvo_NS1
HTH_50
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BDV01403
LinkDB
All DBs
Position
1613107..1614687
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AA seq
526 aa
AA seq
DB search
MNAFDSLHAFTILHALLRDLDPLGPLQTSLETLLQRTAQAMGYRRMGVAIFDPKTNTISF
DLFYGHHGQAKAVYTPGQGVTGQVVQTGQPIVVENMASDPRFLNKALGRPKEELHELAFV
CVPIHRTTTQGTPEVLGVLSADIPRQERRSLDGHQAFLEVLAAVIARQTAYLQEAMAQKE
LWASMGFLGEASERAKALSQSKIVATSKAMSFVMGQVLQVAPSKAAVLLRGESGTGKELI
AEAIHNASPRRDRPLVRLNCAALPSDLLESELFGHERGAFTGAVSAKKGRFELAHTGTLF
LDEIGELSPEAQAKLLRALQEGEVQRVGSEKPITVDVRIICATHQPLEQLIKTGKFREDL
YYRINVFPIFIPPLRERREDILPLAEYFLQWFCTEYGKTIKRISMPAIDLLTQYAWPGNV
RELRNCMERATLICNEEAIRTYHLPPTLQTAESSATDIQLSFGEAVAKFEQELLIEALQR
CRGNMLQVARDLRTSYRIIHYKIKKYNIDPKKYAKRQRGHPSSSSS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctttgacagcctgcacgccttcaccatcttgcacgcactccttcgggacctc
gatcctctcgggcccttgcagaccagtctcgagacgctgttgcagcgcaccgcgcaagcc
atgggctaccgccgtatgggggtcgccatcttcgaccccaagaccaataccatctctttc
gacctcttctacggccaccacggccaggccaaggcggtctacacaccaggccaaggggtc
acgggccaggtggtgcagaccggccaacccattgtcgtggaaaacatggccagcgacccc
cgctttctcaacaaggccttggggcggcccaaagaggaactccacgagctcgcctttgtc
tgtgtgccgatacaccgcaccaccacccaaggaacgccggaggtcctcggtgtactcagc
gccgacatcccccgccaagaaaggcgcagcctcgacggacaccaggcctttctcgaggtc
cttgccgcggtcatcgcccgccaaacggcatatctccaggaggccatggcccaaaaagag
ctctgggcgtccatgggttttttgggggaggcgagcgagcgcgccaaggccctgagccaa
agcaagatcgtggccacatccaaggccatgtcctttgtcatggggcaagtgcttcaagtg
gccccgagtaaagccgccgtgctcttgcggggggagtcaggcaccggcaaggagctcatc
gccgaggccatccacaacgccagccctcgccgggaccggccgctggtgcgcctcaactgc
gccgccctcccttcggacctcttggaaagcgagctcttcgggcacgagcgtggggccttc
accggcgcggtgagcgccaagaagggccgtttcgaactggcccataccggcaccctgttt
ttggacgaaatcggcgagctctccccagaggcgcaggccaaactcctgcgcgccctgcaa
gaaggcgaagtccaacgggtggggagcgaaaagcccattaccgtggacgtacgcatcatc
tgcgccacccaccaacccttggaacagctcatcaagaccggcaaattccgcgaagacctc
tactaccgcatcaacgtgttccccatcttcatccctcccctgcgggagcggcgcgaggac
atcctgccgctggcggagtattttctccaatggttttgcacggaatatggcaaaaccatc
aaacgcatctccatgcccgccatagatttgctcacgcaatacgcctggccggggaacgtg
cgcgaactgcgcaactgcatggaacgggccactcttatctgcaatgaagaggccatacgc
acatatcatcttccaccgacgctgcagaccgccgaaagctcggccacggatattcagctc
tcttttggagaggcggtggcaaaattcgagcaggagctcttgatcgaggcgcttcagcga
tgcaggggcaacatgctccaggttgcccgggatctgcgaacaagctaccgcatcatccac
tacaagatcaaaaaatacaatattgaccccaaaaaatacgccaagcgccagcgtggccat
ccaagctcatcttcgtcatga
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