Thermodesulfomicrobium sp. WS: TDMWS_16840
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Entry
TDMWS_16840 CDS
T08730
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew00750
Vitamin B6 metabolism
thew01100
Metabolic pathways
thew01240
Biosynthesis of cofactors
Module
thew_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
TDMWS_16840 (pdxS)
Enzymes [BR:
thew01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
TDMWS_16840 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
IGPS
NMO
NanE
Mcm-like_N
Motif
Other DBs
NCBI-ProteinID:
BDV01599
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Position
complement(1809402..1810280)
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AA seq
292 aa
AA seq
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METRDVLGEGLARMLKGGVIMDVVSPEQAVVAEQAGACAVMALERVPADIRAQGGVARMS
DPGLIREIMAAVSIPVMAKCRIGHFVEARILEAVGVDYIDESEVLTPADESHHIDKRSFR
VPFVCGCRDLGEALRRVAEGAAMIRTKGEAGTGDVSEAVRHARLVQGAIRRLCSMAEDEV
AAYAKELRAPLDLVWQTRKLGRLPVVHFAAGGIATPADAALMMHLGMDGVFVGSGIFKSA
DPQARARAIVQAVTHFADFEKLAEISAGLGEAMSGVAVQQLADAARLAQRGW
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggagacacgcgacgtattgggcgagggactggcgcgcatgctcaagggtggggtgatc
atggatgtggtgagcccggagcaggcggtggtggcggagcaggccggggcctgcgcggtc
atggccttggagcgggtaccggcggatatccgcgcccagggcggggtggcgcgcatgtcc
gaccctgggctcatccgggagatcatggctgcggtgagcatcccggtcatggccaaatgc
cgcatcggccatttcgtggaggcccgcatcctggaggccgtgggcgtggactacatcgat
gagagcgaagtcctgaccccggcggacgaatcccaccatatcgacaagcgcagctttcgt
gtgccctttgtgtgcggctgtcgtgacctgggtgaggccctgcgccgcgttgccgagggg
gcggccatgatccgcaccaagggcgaggcgggcaccggggatgtgtccgaggcggtgcgc
catgcccgcttggtacagggggccatccggcgtctgtgctccatggccgaggacgaagtg
gcggcctacgccaaggaactgcgcgctccgctggatctggtgtggcagacgcgaaaactc
ggccgcttgccggtggtgcattttgccgcgggcggcatcgccacgccggcggatgcggca
ctcatgatgcacctgggcatggacggggtgttcgtgggctccggcatcttcaagagtgcg
gacccgcaggcccgcgcccgggccattgtccaggcggtcacgcattttgccgactttgag
aaactcgccgagatcagtgccggcctgggcgaggccatgagcggcgtggcggtgcagcaa
ttggcggacgcggcccgcctggcgcagaggggctggtga
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