Thermodesulfomicrobium sp. WS: TDMWS_16910
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Entry
TDMWS_16910 CDS
T08730
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew00470
D-Amino acid metabolism
thew00550
Peptidoglycan biosynthesis
thew01100
Metabolic pathways
thew01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TDMWS_16910 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TDMWS_16910 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TDMWS_16910 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thew01011
]
TDMWS_16910 (ddl)
Enzymes [BR:
thew01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
TDMWS_16910 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
thew01011
]
Precursor biosynthesis
Amino acid ligase
TDMWS_16910 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
ATPgrasp_ST
ATPgrasp_YheCD
PAS
Motif
Other DBs
NCBI-ProteinID:
BDV01606
LinkDB
All DBs
Position
1814541..1815449
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AA seq
302 aa
AA seq
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MNILLIAGGWSPERDVSLLGAEQIEGALRRLGHQVRRFDPEGGLHGIFDAAQGQDFAFLN
LHGSPGEDGLVQALLETIPLPYQGAGPRGSLLALDKAAAKAVFVRAGLATPAWEFVSANR
IASWHPRLPYPLVLKPNRGGSSVGVAFVNNEAERITQLARPEVLGQDLIAEVCIHGVELT
CGVLEGKTLPPILIRPKAGSFFDYASKYLPGASDEICPAPVDAATTRKLQEMAQTAHEAL
GLADYSRSDFLMDGAGKLWILETNTLPGMTATSLLPQEAAAVGLSFEDLLAELIRLGMRK
HS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccttttgattgccggaggttggtccccggagcgtgacgtctccttgctcggg
gccgagcagatcgagggcgccctgcgccgtctgggccaccaggtgcgacgcttcgacccc
gaaggcggactgcacgggatcttcgacgccgcacaaggccaggatttcgcctttctcaat
ctccacggctcccccggcgaagacggcctggtgcaggcccttctcgagaccatcccgctt
ccctaccagggcgctggccctcgtggttcgctgctcgccctggacaaggccgcggccaag
gccgtctttgtccgtgccgggctcgccaccccggcctgggagttcgtgtccgccaaccgg
atcgcctcgtggcacccccggctgccctatcctttggtgctcaagcccaatcgcggcggc
tccagcgtcggcgtcgcctttgtgaacaatgaggccgagcgcatcacccagctcgcccgg
cccgaagtgctcggccaagacctcatcgccgaggtgtgcatccacggagtggaactcacc
tgcggcgtcctggagggcaagacgcttccgccgatcctcatccgccccaaggccggcagc
ttcttcgactacgcgagcaaatacctgcccggcgccagcgacgaaatctgccctgcaccc
gtggacgccgccaccacccgaaaactccaagagatggctcaaaccgcccatgaggcgtta
ggacttgccgactacagccgctcggatttcctcatggatggcgcagggaaactctggatc
ctcgaaaccaacaccctgccgggcatgaccgccacgagccttttgccccaagaggccgcg
gctgtggggctttccttcgaagacctgcttgccgaactcatccgtctggggatgcgcaag
cattcatga
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