Thermodesulfomicrobium sp. WS: TDMWS_18550
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Entry
TDMWS_18550 CDS
T08730
Symbol
rluD_coaE
Name
(GenBank) dephospho-CoA kinase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
thew
Thermodesulfomicrobium sp. WS
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thew03009
]
TDMWS_18550 (rluD_coaE)
Enzymes [BR:
thew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
TDMWS_18550 (rluD_coaE)
Ribosome biogenesis [BR:
thew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TDMWS_18550 (rluD_coaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
CoaE
AAA_18
S4
AAA_28
MeaB
AAA_22
AAA_17
AAA_33
Sigma54_activ_2
Rad17
Viral_helicase1
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BDV01770
LinkDB
All DBs
Position
1989402..1991000
Genome browser
AA seq
532 aa
AA seq
DB search
MTHALQVDPHWAGTRLDQFWMHHLGSTVPRARIQEWIRAGLATVDGRPCGKPSLRVSAGQ
RLTLEVPDPSPATVTPAPGPLSVLYADAHLVVIDKAPGLTTHPAPSVEGPTVVERAAAAF
PALLTLDGDRPGVVHRLDKDTSGLLVLALSEPARVGLTAAFSERRVHKEYLAVVAGALHE
PMRVDLPMDRHPTLKTRMAVVPHGRPALTEVWPLWQAPGGQATLVRVRIHTGRTHQIRVH
LAAQKHPLLGDAVYAPGPIAAMAPRQMLHSWYLAFAHPITGQRLEFRAAPPQDFWDTLEA
LTHRTLRLGITGCPGCGKSTVTRMLAEAGVPTVSADAIVAQSYLPGAVGWEILRCHYGRR
FTPSDDAPVDRTALAQAMEDPRLRREVESLIHPVVRAEVAAFWEAHRDAPVAAAEIPLLL
ESGMAEDCDLVLGVFCPDELRHRRLTDRGWGPEQRSRMDSWQWPQARKIRAAHLVVDNSG
PLDDTLRRTLAALAVAMRLAQGRRQRLLHRLRHFLHHGAWPESPGSPNVSSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgcgctccaggtggatcctcattgggccgggacacggctcgatcaattctgg
atgcaccatctggggagcactgtcccgcgcgcccgcatccaggaatggatccgcgcaggg
ctggccaccgtggatggccgcccctgcggcaaaccgagtctgcgggtaagcgccggtcag
cgcctcaccctggaggtcccggacccttctcccgccaccgtcaccccagcccccggcccc
ctgtccgtgctctatgccgatgcccatctggtggtcatcgacaaggccccgggcctcacc
acccaccccgccccttcggtggaaggccccaccgtggtggagcgggcggctgcggccttt
cccgccttgctcaccctcgacggcgatcggcccggcgtggtccaccgcctggacaaggac
acctcaggcctgctggtactcgccctctccgaaccggcacgggtcggcctcaccgccgcc
ttcagcgaacgccgcgtgcacaaggaatacctggccgtggtggccggcgccctccacgag
cccatgcgcgtggacctgcccatggaccggcacccgaccctcaagacccgcatggcggtg
gtgccccacggccgccccgccctcaccgaagtctggcccctgtggcaggccccaggcggc
caagccaccttggtgcgggtgcgcatccatacgggccgcacccatcagatccgggtgcac
cttgccgcccaaaagcacccgctcctcggcgatgcggtgtacgcgcccgggcccatcgcc
gccatggccccgcgccagatgctccatagctggtacctggcctttgcccaccccatcacc
ggccagaggctggaattccgcgccgcaccgccccaagacttctgggacactctcgaagcc
ctcacccaccgcacgctgcggctgggtatcaccggctgccccggatgcggcaagagcacc
gtcacccgcatgctggccgaggccggcgtccccaccgtgagcgccgacgccatcgtggcc
caaagctaccttcccggcgccgtgggatgggagatcctccgctgccactacggccgcagg
ttcacccccagcgacgacgctcccgtggaccggactgccctggcgcaggccatggaagac
ccgcgcctgcgccgggaagtggagtccctcatccaccccgtggtgcgcgcagaagtggcg
gccttctgggaagcgcaccgcgacgccccggtggccgcggcggagatcccgctccttctc
gaaagcggcatggccgaggactgtgacctggtgctcggggtcttctgtccggacgaactc
cgccaccggcgcttgacggaccgaggctggggcccggagcagcgaagccgcatggactcc
tggcaatggccgcaagcgcgcaagatccgcgccgcccatctggtggtggacaattccggc
cccctggacgataccctccgtcgcaccctggccgcgctggccgtggccatgcgcctggcc
caaggccgtcgccagcgtctcctccaccgcctgcgccacttcctccaccacggcgcatgg
cccgaatcccctgggagcccgaatgtttcctcttcgtga
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