Thermodesulfomicrobium sp. WS: TDMWS_20570
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Entry
TDMWS_20570 CDS
T08730
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thew
Thermodesulfomicrobium sp. WS
Pathway
thew03420
Nucleotide excision repair
thew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TDMWS_20570
03430 Mismatch repair
TDMWS_20570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thew03400
]
TDMWS_20570
Enzymes [BR:
thew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TDMWS_20570
DNA repair and recombination proteins [BR:
thew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TDMWS_20570
MMR (mismatch excision repair)
Other MMR factors
TDMWS_20570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
RecR_HhH
AAA_30
AAA_12
DEAD
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
BDV01972
LinkDB
All DBs
Position
2209311..2211398
Genome browser
AA seq
695 aa
AA seq
DB search
MPIDYHHDLNPAQFQAATTLTGPLLVIAGAGSGKTRTVVYRLARLVESGVEPGRIVLLTF
TRKAAANMLHRAADLVGHGLAAVRGGTFHAFAYGILRRHAERLGYGQGITILDHADMESL
LAEAKERANVASKDKRFPKRATIAALISRCRNKEIALEEALAQDYHLQQFQDDLERIFAA
YSQLKRHYGVMDYDDLLFELERLLTEHADIRSHLAQSISHVMVDEYQDTNRVQARLIRLL
FAPEDPAPNIMAVGDDAQSIYAFRGADVRNILEFPRSYPGATVIKLEQNYRSTQPILGLA
NHLLTGFRNAYAKNLFSLLEDSRPPLWVRTLTDRTQAALVRACIQEWAGEIPLTEIAVLF
RAGYQSYHVELELSKAGIPFRKYGGMRFAEAAHIKDVLAFLRVADNPADAPAWQRLLALI
PGIGPKSAARITNAILTADSAALHKMTATRPMLAEVLALTDALRDMDAPAPALERILAFY
QPVLRETYPDDYPRREAGLEELLHIAQGYTSRTDFLSDVTLETPEPQEAGDAAVILSTVH
SAKGLEWDAVIIIDLVEDRFPSRHALLDADALEEERRLLYVACTRARRRLALFSPEAVTT
QAGTMPARPCAFLEDAPEAILARTRERLAPAPTAPEAPSLSASPAGAIPKDGGFCRHKIF
GRGKIVAVVPPDKYRILFPGFGLKLILQNYVEMEA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgactaccaccacgacctcaaccctgcccaattccaggcagccaccaccctg
actggcccgctgctcgtcatcgccggcgcgggatccggcaaaacccgtaccgtggtctac
cgcctggcccggctggtggaaagcggcgtggagccgggacgcatcgtgctcctcaccttt
acgcgcaaggccgcggccaacatgctccaccgggcggccgacctcgtgggccacggactt
gccgcagtgcgcggcgggacattccatgcctttgcctacggcatcctgcgccgccacgcc
gaacgcctggggtatggacaggggatcaccatcctcgaccacgccgacatggaaagcctc
ttggccgaggccaaagagcgcgccaatgtcgccagcaaagacaagcgctttcccaagcgc
gcaaccatagccgccctcatctcccgctgccgcaacaaggagatcgctctggaagaagcc
ctggcccaggactatcacctgcagcaattccaggacgacctcgagcgcatcttcgcggcc
tacagtcagctcaagcgtcactacggggtgatggactacgatgacctgctcttcgagctc
gagcgcctgctcaccgagcacgccgacatccgcagccatctggcgcaatccatctcgcac
gtgatggtggacgagtatcaggacaccaaccgcgtccaggcgcggctcatccgcctcctc
ttcgcgcccgaagacccggcgcccaacatcatggccgtgggcgacgacgcccagtccatc
tacgccttccgcggggcggacgtgcgcaacatcctcgagtttccgcgcagctatcccggg
gccaccgtgatcaagctggagcagaactaccgctccacccagcccatcctggggctcgcc
aaccacctgctcaccgggttccgcaacgcctacgccaagaacctcttttccctgctggag
gattcgcgaccgccgctatgggtgcgcaccctcaccgaccgcacccaggcggccctggtg
cgggcctgcatccaggaatgggcaggagaaattcccctgacggagatcgcggtgctcttc
cgggccggctaccagtcctaccatgtggaactggagctctccaaggccgggatccccttt
cgcaagtatggcggcatgcgctttgccgaggccgcccacatcaaggatgtgctcgccttt
ttgcgtgtggccgacaaccctgccgacgccccggcctggcagcgcctgctggcattgatc
cccggcatcggccccaagagcgccgcgcgcatcaccaacgccattctcaccgcagacagc
gccgccctgcacaaaatgaccgccacccgccccatgctggcggaagtgctcgccctcacc
gacgccctgcgggacatggacgcccccgcgcccgccctggagcgcatcctcgccttctac
cagcccgtgctgcgcgaaacctatcccgacgactacccccgccgcgaggctggcctcgaa
gagctgctccacatcgcccaaggctacacctcccggaccgattttttgagcgatgtcacc
ctggagaccccggaacctcaagaggccggcgacgcggccgtgatcctctccaccgtgcat
tccgccaagggcctcgagtgggacgcggtcatcatcatcgacctggtggaagaccgcttc
ccctcgcgccacgccctgctggacgccgacgccctggaagaggaacgccgcctgctctac
gtagcctgtacccgggcgcggcgccgacttgcgctcttttcgccggaggccgtcaccacc
caggcaggcaccatgcccgcccggccctgcgccttcctcgaagacgccccggaagccatc
ctggcccgcacccgcgagcgcctcgcccctgcgcccacagcgcctgaggcgccttcgcta
tccgcctcgcctgcaggcgccatccccaaggacggcggtttttgccgacacaaaatcttt
ggccgcggcaagatcgtggccgtggtgccgccggacaagtaccgcatcctctttcctgga
ttcggcctcaaactcatcctgcaaaactacgtggagatggaagcatga
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