Thermomonas sp. XSG: ICG51_000597
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Entry
ICG51_000597 CDS
T10183
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
thex Thermomonas sp. XSG
Pathway
thex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ICG51_000597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thex03019
]
ICG51_000597
Enzymes [BR:
thex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ICG51_000597
Messenger RNA biogenesis [BR:
thex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ICG51_000597
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
ERCC3_RAD25_C
CMS1
Cas3-like_C_2
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QNU14367
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All DBs
Position
642731..644053
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AA seq
440 aa
AA seq
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MSFESLGLAPALLRALADNNYTTPTPIQQQAIPLILAGHDVLGGAQTGTGKTAAFGLPML
QKLAEMPKPEGLHRPRVLVLTPTRELAVQVSENLRSYAKHLRLNVTALFGGVGMQPQVEA
FRRGVDVLVACPGRLIDHLERGTCKLGNVQMLVLDEADRMLDMGFLPSIKRVMKHVPAQR
QTLLFSATFEPRIKALALEFMKDPQQVQVAAQNTVIETISHHAHPVDGSKKRDLLIDILA
RRHTEQVLVFGKTKHGCNRLAEQLESAGLPALAIHGNKSQAARQKALNEFKSGKTRILVA
TDVAARGLDIPDLPLVINHDLPMVAEDYVHRIGRTGRNGATGEAISLVSPDEANLLRQIQ
KLLGREIAMEVVPGFEPSRSIRSDAKPFDNAPRSPRPARNRRPHGKPRTAEAHAHAGPKQ
PRDGRRGNAPGAGRRDSRQG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgaatccctgggccttgcgcccgcgttgctgcgcgcgcttgccgacaacaac
tacaccaccccgacccccatccagcagcaggcgatcccgctgattctggccggccatgat
gtgctgggcggcgcccagaccggcaccggcaagaccgccgcgttcggcctgccgatgctg
cagaagctggccgagatgcccaagcccgagggcctgcaccgcccgcgcgtgctggtgctc
acccccacccgcgagctggccgtgcaggtcagcgagaacctgcgcagctacgccaagcac
ctccgcctcaacgttaccgcgctgttcggcggcgtcggcatgcagccgcaggtggaagcg
ttccgccgcggcgtggacgtgctggtggcctgcccgggccgcctgatcgaccacctcgag
cgcggcacctgcaagctcggcaacgtgcagatgctggtgctggacgaagccgaccgcatg
ctcgacatgggcttcctgccgtcgatcaagcgggtcatgaagcacgtgcccgcgcagcgc
cagaccctgctgttctcggccaccttcgagccgcgcatcaaggcgctggcgctggagttc
atgaaggacccgcagcaggtgcaggtggccgcgcagaacaccgtgatcgagaccatcagc
caccacgcccacccggtcgacgggtcgaagaagcgcgacctgctgatcgacatcctggcc
cgccgccacaccgagcaggtgctggtgttcggcaagaccaagcacggctgcaaccgcctg
gccgagcagctggaaagtgccggcctgccggcgctggcgatccatggcaacaagagccag
gccgcccgccagaaggcgctgaacgagttcaagtcgggcaagacccggatcctggtggcc
accgacgtggccgcgcgcggactcgacattccggacctgccgctggtgatcaaccacgac
ctgccgatggtggccgaggattacgtccaccgcatcggccgcaccggccgcaacggcgca
accggcgaagcgatttcgctggtgtcgccggacgaggccaacctgctgcgccagatccag
aagctgctgggccgcgagatcgcgatggaagtcgtgccgggcttcgagccttcgcgttcg
atccgcagcgacgccaagccgttcgacaacgcgccgcgcagcccgcgtcccgcccgcaac
cgccgtccgcacggcaagccgcgtaccgccgaggcgcatgcgcacgccggccccaagcag
ccgcgtgacggccgccgcggcaacgcgccgggcgccgggcgccgcgattcgcgacagggc
tga
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