Thermomonas sp. XSG: ICG51_001625
Help
Entry
ICG51_001625 CDS
T10183
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
thex Thermomonas sp. XSG
Pathway
thex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ICG51_001625 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thex03021
]
ICG51_001625 (rho)
03019 Messenger RNA biogenesis [BR:
thex03019
]
ICG51_001625 (rho)
Transcription machinery [BR:
thex03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ICG51_001625 (rho)
Messenger RNA biogenesis [BR:
thex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ICG51_001625 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
OB_RNB
AAA
Spore_III_AA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QNU15271
UniProt:
A0A7H1RLY2
LinkDB
All DBs
Position
complement(1733895..1735613)
Genome browser
AA seq
572 aa
AA seq
DB search
MSDTPNDASGEVAEKRVRKPRAAKPRAPEQSEIALPPAAPAAAAPPAAPAPAPAQPATPP
APAPAAPPESAPAPAQGEQQREGGRQQQGDAGSQDGQDGGQRDSHRNSRRERFKNRRDRQ
RDRQRDGGMADEGGNGENFVPRPHPQVPEGFPTYSLGDLKRMPAHKLLEIADQLQISEGV
ARARKQDIIFAILKVLTRHGEGVQADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQI
RRFNLRTGDHVSGRIRWPKDGERYFALNIVDTINGEPIEASKNKTLFENLTPLFPRKRFK
LERGDGSSEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQIASAITYNHPDVHLIV
LLIDERPEEVTEMQRTVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDS
ITRLARAYNNVMPSSGKVLTGGVDSNAMHRPKRFFGAARNVEEGGSLTIIATALVDTGSA
MDKVIYEEFKGTGNSEVHLDRRITEKRVYPAIGVNLSGTRREDLLIEPDLLQKIWILRKL
LHPMDEIAAMEFLLDKMKNTKSNDEFFSSMRK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgatacccccaacgacgccagcggcgaagtcgccgagaagcgcgtgcgcaagccc
cgcgcggccaagccgcgcgcgcccgaacagtccgaaatcgcgctgccgccggcagcgccc
gcagcagcagccccgccagcggcaccggcaccagcaccggcacagccggctacaccgccg
gctcccgctcccgcagctccgcccgagtccgcgccggccccggcgcagggtgagcagcaa
cgcgaaggtggtcgccagcagcagggcgatgccggtagccaggacggccaggacggcggc
cagcgcgacagccaccgcaacagccgccgtgaacgcttcaagaaccgccgcgatcgccag
cgcgaccgccagcgcgacggtggcatggccgacgagggtggcaacggcgagaacttcgtg
ccgcgcccgcacccgcaggtgcccgaaggcttccccacctattcgctgggcgacctcaag
cggatgcccgcgcacaagctgctggaaatcgccgaccagctgcagatcagcgagggcgta
gcccgcgcgcgcaagcaggacatcatcttcgcgatcctcaaggtgctgacccgccacggc
gaaggcgtgcaggccgacggcgtgctggagatcctgcccgacggcttcggcttcctgcgc
gcggccgaggccagctacctggccggccccgacgacacctacatcagcccgtcgcagatc
cgccgcttcaacctgcgcaccggcgaccacgtctccggccgcatccgctggcccaaggac
ggcgagcgctacttcgcgctgaacatcgtcgacaccatcaacggcgagccgatcgaggcg
tcgaagaacaagaccctgttcgagaacctcaccccgctgttcccgcgcaagcgcttcaag
ctggagcgcggcgacggttcaagcgaggacatcaccggccgcatcctcgacctgatggcc
ccgcagggcaagggccagcgcgccctgatcgtcagcccgccgaaggccggcaagacgatg
atgatgcagcagatcgccagcgccatcacctacaaccaccccgacgtgcacctgatcgtg
ctgctgatcgacgaacgtccggaagaagtgaccgagatgcagcgcaccgtgcgcggcgag
gtcatctcctccaccttcgacgagccggccgcgcgccacgtgcaggtcgcggaaatggtg
atcgagcgcgccaagcgcctggtcgagcacaagaaggacgtggtgatcctgctcgactcg
atcacccgcctcgcccgcgcctacaacaacgtgatgccgagcagcggcaaggtcctgacc
ggcggcgtggactccaacgccatgcaccggccgaagcgcttcttcggcgcggcccgcaac
gtcgaggaaggcggcagcctgaccatcatcgccaccgcgctggtcgacaccggcagcgcg
atggacaaggtgatctacgaggaattcaagggcaccggcaacagcgaagtgcacctggac
cgccgcatcaccgagaagcgcgtctatccggcgatcggcgtgaacctgtccggcacccgc
cgcgaggacctgctgatcgaacccgacctgctgcagaagatctggatcctgcgcaagctg
ctgcacccgatggacgagatcgccgccatggagttcctgctcgacaagatgaagaacacc
aagtcgaacgacgagttcttcagctcgatgcgcaagtaa
DBGET
integrated database retrieval system
