Thermomonas sp. XSG: ICG51_002077
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Entry
ICG51_002077 CDS
T10183
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
thex Thermomonas sp. XSG
Pathway
thex02020
Two-component system
thex02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ICG51_002077
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ICG51_002077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thex03021
]
ICG51_002077
Transcription machinery [BR:
thex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ICG51_002077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_Tnp_ISL3
HTH_23
Mfa1
Motif
Other DBs
NCBI-ProteinID:
QNU15691
LinkDB
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Position
complement(2205013..2206437)
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AA seq
474 aa
AA seq
DB search
MKQRLSPATQQHLVLTPQLRQAIRLLQLSAAELEAEVAEAVASNPLLDWQDDGALVDPPV
TAGAVPASPEPASGDIETAPDEHWETDTEEWQASGSAPAGRDDGSEVEQPDTEESLQDHL
LWQLHLGHFSPRDTRIGIALIDAIDDDGYLREDLATLAASLRADIDATPAEMLPVLHRIQ
QFDPVGVGARDLGECLCLQLQALPADTPARALALSIAAGPLPQLPKLGIDGVSALLGCPP
AAAEAAVQLLRTLDPRPGAQHGALPAGSYIRPDCVVWRQQGLWQVALAGGALPRVTIQRD
YQQMIRHASSCDADYLRGHLQEARWLLKGLEARADTLLRVVRCLVREQAAFLEFGPQALR
PLTLRSVAADLGLHESTVSRAIARKYVRTPRGTLALRDFFASGIGTDDGGSASSTAIQNR
IRQLVAGENPRKPLSDARLADTLKAEGVPVARRTVAKYREALQIPASHERMRIG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcgcctgtcccccgcgacgcagcaacacctggtcctgaccccgcagctccgt
caggcgattcgcctgttgcagctttccgccgcggagctggaggcggaggtggccgaagca
gtggcgagcaatccgctgctggactggcaggacgacggggcgctggtcgacccaccagtc
actgccggcgcagtacccgcatcgccagaacccgcctccggcgatatcgaaaccgcgccg
gatgagcactgggagaccgacaccgaagagtggcaggcctccgggagcgcgcctgcggga
cgcgatgacggcagcgaggtcgagcagcccgataccgaggagtctttgcaggaccacctg
ctgtggcagctgcatctgggccacttcagtccgcgcgacacccgcatcggcatcgccctg
atcgatgccatcgacgatgacggctacctgcgcgaggacctggccacactggctgccagc
ctgcgcgcggacatcgacgccacgcccgcggaaatgctgccggtgctgcaccgcatccag
cagttcgacccggtcggcgtgggcgcgcgcgacctgggcgagtgcctttgcctgcaactg
caggcgctgccggcggacacgcccgcgcgcgcgctggcgctgtcgatcgcggctggcccg
ctgccgcagctgccaaaactaggcatcgatggtgtcagcgccctgctcggctgtcccccg
gcagcggcagaggccgcggtgcagctgttgcgaacgctggatccgcgccccggcgcccag
cacggcgcactgcccgccggcagctacatccgccccgattgcgtggtatggcgccagcag
ggcctgtggcaggtggcgctggcgggcggcgcactgccccgggtgacgatccagcgcgac
taccagcagatgatccggcacgccagcagctgcgacgccgactacctgcggggtcacctg
caggaagcgcgctggctgctgaagggcctcgaggcgcgcgccgacaccctcctgcgggtg
gtgcgctgcctcgtgcgcgaacaggccgcgttcctcgaattcggtccgcaggcgctgcgt
ccgctgaccctgcgcagcgtggccgcggatctgggcctgcacgagtccacggtgtcacgc
gcgatcgcccgcaaatacgtgcgcacgccgcgcgggacgctggcgctgcgcgacttcttc
gcttccggcatcggcaccgacgacggcggcagcgcgtccagcaccgcgatccagaaccgc
atccgccagctggtggcgggggagaacccgcgcaagcccttgtcggatgcacggcttgcc
gatacgttgaaggcggaaggtgtgccggtggcaaggcggacggtggcgaagtaccgcgaa
gccctgcagatcccggcatcgcacgagcgtatgcgcatcggctga
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