Thermosynechococcus sp. TA-1: JW907_00880
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Entry
JW907_00880 CDS
T10117
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
they Thermosynechococcus sp. TA-1
Brite
KEGG Orthology (KO) [BR:
they00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
they03016
]
JW907_00880 (truB)
Enzymes [BR:
they01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JW907_00880 (truB)
Transfer RNA biogenesis [BR:
they03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JW907_00880 (truB)
Prokaryotic type
JW907_00880 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QSF49376
LinkDB
All DBs
Position
complement(189111..189974)
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AA seq
287 aa
AA seq
DB search
MFGFLNLNKPAGCTSHDCINELRKRLRLKRIGHGGTLDPMATGVLPIALGAATRLLPYLS
DRKAYIGTVRFGITTTTDDITGDICQEQSASHLTLEAIEEQLPQFIGKIEQYPPAYSAIQ
VDGQRLYARARAGEVVSVPPRIVEVYSIDVLDWQAGCYPVLTLRITCGGGTYIRALARDL
GAALGVGGTLAALQRIESGGLRIEESHSLESISPEHLPLRPPQAVLSHLPWLELNEVQLN
DWYHGRAVIGEGLPPAERFVGVTFAATCVGIGVSGGDRLHPKVVLKA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttttttgaatctcaataaacccgctggctgcacttcccacgactgcattaac
gaactgcgaaagcggctgcggctcaagcgcattggtcatgggggcacattagatccgatg
gccacaggggtgctgccgatcgcccttggtgcagcgacgcgactcctcccctatttgagc
gatcgcaaggcctatattggcacggtgcgctttggcatcaccacaaccacggatgacatt
acgggtgacatttgccaagaacaatctgccagtcacctcacccttgaggccattgaggaa
cagcttccccaattcattggcaagattgagcaatatccccccgcctatagtgcgattcaa
gtggatggccagcggctctatgcccgtgcccgtgcgggtgaagtcgtgagcgtgccgccg
cggatcgttgaggtgtacagcattgatgtcttagattggcaagcaggatgctacccagta
ttgaccctgcgcattacctgtggcggtggcacctatattcgcgcccttgcccgcgatttg
ggggcggcactgggggtagggggaacgctggcagccctgcaacggattgaaagtggtggc
ctgaggattgaggagagccattccctagaaagcatttcgccagagcatttaccactgcgc
ccgccccaagcggttctctcacatctaccgtggcttgaactcaatgaagtacaactcaac
gactggtatcatggccgcgccgtgattggtgaggggctaccgccggcggagaggttcgtg
ggcgtcacctttgccgctacctgtgtggggatcggagtgagtgggggcgatcgcctgcat
cccaaggtggttctcaaggcataa
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