Thermosynechococcus sp. TA-1: JW907_03080
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Entry
JW907_03080 CDS
T10117
Name
(GenBank) PAS domain S-box protein
Organism
they Thermosynechococcus sp. TA-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
PAS_9
Response_reg
HATPase_c
PAS
PAS_4
HisKA
GAF_2
PAS_3
GAF_3
PAS_8
Diguanyl_cycl_sensor
HPTransfase
PDE8A_N
HATPase_c_3
FleQ
Motif
Other DBs
NCBI-ProteinID:
QSF49767
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All DBs
Position
665893..669945
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AA seq
1350 aa
AA seq
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MPAAPLPANEPERQRALEQYRVLDTPPEPIFDEITNLAAAICETPIALISLIDRQRQWFK
SKVGLDACETPRNIAFCAHVILQPELVVVPDARLDPRFADNPVVTGPPYIRFYAGMPLMT
PDGYGIGTLCVVDYKPRELNPVQQQTLRTLARQVISELEIRHHLEVTQQQLAYIQQMSSL
QEAVFNSSNHAIIATRTDGIITLLNRAAEEWLGYSASELVGKATPERFHDPQEVERYAQI
LSAQLGEPIPAGFETLVARARRGLADEQEWTFVRRDGSHFPVSLSVTPIHDSQEQLIGFL
ELAVDITDKKQIEAELRLRERAIIASTNGIVITDYRQPDNPIIYVNPAFERMTGYRAAEV
IGKNCRFLQGRDRHQPGAEAIRNAIKKGQSCRVVLRNYRKNGQPFWNELAISPIYNEFGE
ITHYIGIQSDVTERQRAQLFLQQQVKRTLLLNRITEEIRQQIEREHICRTAVQQVGATLN
VSRCLLFVYQENAPSPMELVAEYCAPGVSSVKECPLDLSQMRGAFLESVFASDEVFSCED
VATDSRLTSLHEYCEVLSVKSAVIVRTAYRNQANGLLILHQCDRQRRWTAAIKSLLKSVA
AQVGIGLAQVQLLEQETRQRQQLQQQMQRALLLNQITEQIRQSLDTERVFETTVTQIGQA
FGVSRCLIHRYEPGPPPRIPDVAEYLQPGYPSMRGVSVPVENNPHALEVIRSDAAVVSHD
VTQEPLLGSAIELCHQFQIQSMLAIRTSYKGVPNGIIGLHQCDRQRQWTPDEIELLEAVA
AQVGIAIAQAELLRHEQQQRQLLAQQNQELEQARLQAELANRAKSEFLATMSHEIRTPMN
AVLGFTNLLLDTPLNEQQRDFLQTLHQAGEALLTIINDILDFSKIESGKLVLEQQPFDVR
ECVEDVLSLLASKAEEKELELLYTCTPETPAQVKGDVTRLRQILVNLVGNGIKFTHEGQV
VVHVSAVKHEGKDFLQFQVQDTGIGIPSDRLDRLFKPFSQVDASTTREYGGTGLGLVISK
RLCELMGGDMSVESTEGQGTTFTFTILAEGQKPYVPPTLHPALEGKRVLVVDDNAASREN
LCTLLQNWGMVPIGYGNPQLVLEAAPQWDLAVIDLNMPEMTGLQLAERLQSEPHFNQQPI
ILLTPLSWLETASRKELITAHVPKPIRPLTLRQTLIKTLSSESATQPALTKTGIDPNLGS
RFPLRILLAEDNAVNQKVALHILKRMGYRADVAANGLEVLEALQQRPYDVVLMDVQMPKM
DGLETTERICAQWPPSQRPWIIAMTANALAGDRERCFAAGMDDYISKPIKIEALAAALNR
CRCLSPKTTYPQLCEQISFEGDQNTAESMT
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgccccattgccagcaaatgaaccggaacggcaacgtgcccttgagcagtat
cgagtcttagatacgcctccggaaccgatctttgatgaaattacgaatttagcggcagcc
atttgcgaaacccccattgctttgattagtctcatcgatcgccagcggcagtggtttaag
tccaaggtggggctagatgcctgtgaaaccccacgcaatattgccttttgtgcccatgtg
atccttcagccagaactggtggtggtaccggatgctcggctggatccccgctttgccgat
aatcccgttgttacagggccgccctatatccgcttctatgcggggatgcccttgatgacg
cccgatggctatggcattggtaccctctgcgtagtggactataagccgcgtgagctaaac
cccgttcaacagcaaaccctgcgcacccttgctcgccaagtcattagtgaactggaaatc
cgccatcacttagaggttacccagcaacaactggcctacattcagcagatgagcagcctc
caagaggcggtcttcaatagtagtaatcacgccatcattgccacccgtaccgatggcatt
atcacgctgctgaatcgagctgctgaggaatggctaggatattctgcctcagaactggtg
ggtaaagcaacgccagaacgtttccatgatcctcaagaggtggagcgctatgcccagatc
ctcagtgcgcaattgggagaacccattcctgcggggtttgagactctcgtggctcgggcg
cggcggggcttggccgatgagcaggagtggacatttgtacggcgggatggctctcacttc
cctgtgtctctgtcagtcaccccgattcatgatagccaagagcaactgattggctttttg
gagttagcggttgatattaccgacaagaagcaaattgaggcagagctgcgactgcgggag
cgagcgatcattgccagtactaatggcattgtgattaccgactaccgccaacccgataat
ccaattatctatgtgaaccccgcctttgagcggatgacaggataccgagcagcggaggtg
attggcaaaaattgccgctttttgcaggggcgcgatcgccatcaaccgggggctgaagcc
attcgtaatgccattaaaaaaggccaatcctgccgggtggtgctgcgcaactaccgcaaa
aacggccaacccttctggaatgaactggccatctccccgatttataacgaatttggtgaa
attacccactacattggcattcaaagtgatgtcaccgaacggcagcgggcacaactgttt
ttacagcagcaggtgaagcgcacgctcctgctcaatcgcattaccgaggaaattcgccag
caaattgaacgggagcacatttgtcgcacggcagtgcagcaggtgggagcaaccctcaat
gtcagtcgttgcctcttatttgtctatcaggagaatgccccttcgccgatggaattggtg
gcagagtattgtgcgccgggggtgtcctccgtcaaggaatgccctctcgatttgagccag
atgcggggagcgtttttggaatcggtttttgcctccgatgaggtgtttagctgcgaggat
gtggcaacagacagtcgtctaacctcacttcatgagtactgcgaagtcctgagtgtgaaa
tctgcggtgattgtgcgcacggcctatcgcaatcaagcgaatggtttgctcattttgcac
cagtgcgatcgccagcggcggtggacggcggccattaaaagtttgctcaagagtgtggcg
gcacaggtggggattggccttgcccaagtacaacttttggaacaggaaacccgccaacgt
cagcaactgcaacagcaaatgcagcgggcattactcttgaatcaaattaccgaacagatt
cgccagagcctcgatacggaaagggtgtttgaaacaaccgtcacccaaattggtcaggcc
tttggggtcagtcgctgtttaattcatcgctacgagccggggccaccgccgcgtattccc
gatgtggctgaatacctgcaaccgggctacccctcaatgaggggggtcagtgtgcccgtg
gaaaacaacccccacgccttggaggttatcaggagtgatgccgccgttgtttcccacgat
gtgactcaagagcccctacttggcagtgccattgagctgtgtcatcaatttcaaatccag
tcaatgctggctattcgcacctcctataaaggcgtacccaatggcattattggcctgcat
cagtgcgatcgccagcggcagtggactcccgatgagattgaacttctggaagcagtggcc
gcgcaagtggggattgcgatcgcccaagcggaactcctgcgccatgaacagcagcagcgc
caattattggctcagcaaaaccaagaactcgaacaagcccgcctgcaagcagaactggcc
aaccgagccaagagtgagtttttggccaccatgagccatgagatccgcacccccatgaat
gcggttttgggctttacgaatttgctcttggatacgcccctcaatgagcagcagcgggac
tttttgcaaactctacaccaagccggcgaggcactcctgacaattattaacgacattctt
gacttctcgaaaattgaatcgggcaaactggtgctagagcagcagccctttgatgtgcgt
gagtgcgtggaggatgtcctgagcctattggccagcaaagccgaggagaaggagttagag
ttactttacacctgtacccccgaaacccctgcccaagttaaaggggacgtgacccggcta
cggcagatcctcgttaacctagtgggcaatggcattaagtttacccacgaaggccaagtc
gtcgtccatgtgagcgcggtcaagcacgagggcaaggattttctccaatttcaagttcag
gatacgggcattggcattcctagcgatcgcttggatcggctcttcaagccctttagtcaa
gtggatgcctcgacgacgcgcgagtatggcggcacaggcctagggctagtcattagcaaa
cgcctctgtgagctaatgggcggcgatatgtccgttgagagtactgaaggtcaaggtaca
acctttacctttacgatcctcgctgaggggcaaaaaccctatgtaccgccaacgcttcat
ccggctttggagggcaagcgtgtcctcgttgttgatgacaatgccgctagccgtgagaat
ctctgcacattactgcaaaactgggggatggtgcctatcgggtatggcaatccccaactg
gttctagaggccgctccccagtgggatttggcagtaattgatttgaatatgcccgagatg
actgggcttcagttagcagagcggttgcaatcagagccgcacttcaatcaacagccgatt
attttgctcacacccctgagttggctggaaaccgctagtcgcaaggagttgatcacagcc
cacgtccccaaacccattcgccctctcaccctacggcaaaccctaattaagacccttagc
agtgaatctgcaactcaacctgccctgacaaaaacaggcattgatcccaacttgggcagt
cgctttccgctgcgtatcctccttgccgaggataatgctgttaaccaaaaggtggcactg
catattctcaagcggatgggctaccgtgccgatgtggcggccaatggcctcgaggtgctt
gaagcactgcaacagcgcccctacgatgtggtgctgatggatgtgcaaatgccaaagatg
gatggcctcgagaccaccgaacgcatctgtgcccaatggcctcccagccagcgtccttgg
attattgccatgacggcaaatgccctagctggcgatcgcgaacgctgctttgcggcgggg
atggatgactacatcagtaaaccgattaaaattgaagcccttgccgcggccctcaaccgc
tgtcgctgcctcagtcccaagaccacctatccgcaactgtgtgagcagatcagctttgag
ggtgatcagaatacagcagagtctatgacctag
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