Thermosynechococcus sp. TA-1: JW907_04060
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Entry
JW907_04060 CDS
T10117
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
they Thermosynechococcus sp. TA-1
Pathway
they03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
they00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JW907_04060 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
they03019
]
JW907_04060 (groL)
03110 Chaperones and folding catalysts [BR:
they03110
]
JW907_04060 (groL)
03029 Mitochondrial biogenesis [BR:
they03029
]
JW907_04060 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
they04147
]
JW907_04060 (groL)
Enzymes [BR:
they01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JW907_04060 (groL)
Messenger RNA biogenesis [BR:
they03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JW907_04060 (groL)
Chaperones and folding catalysts [BR:
they03110
]
Heat shock proteins
HSP60 / Chaperonin
JW907_04060 (groL)
Mitochondrial biogenesis [BR:
they03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JW907_04060 (groL)
Exosome [BR:
they04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JW907_04060 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JW907_04060 (groL)
Exosomal proteins of breast cancer cells
JW907_04060 (groL)
Exosomal proteins of colorectal cancer cells
JW907_04060 (groL)
Exosomal proteins of bladder cancer cells
JW907_04060 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Motif
Other DBs
NCBI-ProteinID:
QSF49938
LinkDB
All DBs
Position
870887..872518
Genome browser
AA seq
543 aa
AA seq
DB search
MAKLVAFHEESRRSLERGINALADAVKITLGPKGRNVVLEKKYGAPQIVNDGVTIAKEIE
LEDAYENTGAQLIREVAAKTNDVVGDGTTTATLLAQALIREGLKNVAAGANPIALKRGME
KAIKTIVEGIAEVAKPVEGDMIAQVATVSAGNDPEVGAMIGEAMAKVGKDGVITIEESKS
LNTEMEIVEGMQFDRGYISPYFVTDPERMIVQLNNAYLLLTDKKITSIQDLIPTLERVAR
SGRPLVIIAEDVEGEALATLVVNKLRGVLNVVAVKAPAFGERRKAMLQDIAILTGGQVIS
EEVGLTLDDVEITMLGEAASVTVTKDTTTLVSEKGNKADIQKRVEQLKKQLAETDSEYDK
EKLQERIAKLVGGVAVIKVGAATETELKDRKLRLEDALNATKAAVAEGIVPGGGVTLLHL
ASRIDALLPSLSPEEQTGARIVASALAAPVAQIADNAGVEGAVVVENVRAGDFNYGFNAA
TGTYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEALVVEKPEPKPAAPADGGMGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattagtcgcatttcatgaagagtcccggcgatcgctcgaacgcggaattaat
gcccttgccgatgccgtgaaaattacccttggccccaaagggcgcaacgtggtgcttgag
aaaaagtatggcgcaccgcaaattgttaacgatggcgtgacgatcgccaaggaaatcgaa
ctggaagatgcctacgaaaatactggtgcccaactgattcgggaagtggccgccaaaacc
aatgatgtcgtcggcgatggcacaaccactgccaccctccttgcccaagccctgatccgt
gaaggcctgaaaaacgtggctgccggtgctaaccccattgccctcaagcgcggtatggaa
aaagcgatcaaaaccattgtcgagggcattgccgaagtggccaaacccgttgaaggggat
atgattgcccaagtggccaccgtctctgccggtaatgatcccgaagtgggagccatgatt
ggtgaagccatggccaaagtcggcaaagatggcgtgatcaccattgaagaatcgaaatcc
ctgaatacagaaatggaaattgttgaggggatgcagtttgatcgcggctacatttccccc
tactttgtcaccgatccagagcggatgattgttcaactcaacaatgcctatctgctgttg
acggacaaaaaaattaccagtatccaagatctgattcccaccctagaaagagtggctcgc
agtggtcgtcccctcgtgatcattgctgaagatgtagaaggcgaagccctcgccacattg
gtggtgaataaactgcggggtgtcctcaatgtggttgccgtgaaagccccagcctttggc
gaacggcgtaaagcaatgctccaagacattgccattctcacgggcggtcaagtcatttct
gaggaagtgggactgaccctagatgatgtggaaatcaccatgctgggagaagccgcctcc
gtcaccgtgaccaaagacaccaccacccttgtgtccgagaaaggcaataaagccgatatt
caaaagcgggtcgaacagctcaagaagcagttggccgagaccgactccgaatacgacaaa
gaaaagctgcaagagcgcattgccaagctcgtgggcggcgtagcggtgatcaaagtgggg
gctgccaccgaaacggaattgaaggatcgcaaactccgcctcgaagatgccctcaatgcc
accaaagcggcagtggctgaagggattgtgcccggcggtggtgtgaccttgcttcacttg
gccagtcgcattgatgccctgctgcctagcctcagtcccgaggaacaaacgggggcacgc
attgttgccagtgccttggcagccccggtggctcaaattgctgacaatgctggtgttgaa
ggagccgtagtcgtcgagaatgtccgtgccggtgactttaactatggctttaatgctgca
acgggcacctatgaagatctcgttagtgccggtattattgaccctgccaaagtcgtacgc
tctgccctgcaaaatgctggttcgatcgccggcatggtactgacgacagaagcccttgtg
gtcgaaaaaccggaaccgaaaccggcagctcctgcggatggcggtatggggggcatgggc
ggcatgatgtag
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