Thermosynechococcus sp. TA-1: JW907_05280
Help
Entry
JW907_05280 CDS
T10117
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
they Thermosynechococcus sp. TA-1
Pathway
they03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
they00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JW907_05280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
they03019
]
JW907_05280
03400 DNA repair and recombination proteins [BR:
they03400
]
JW907_05280
Enzymes [BR:
they01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JW907_05280
Messenger RNA biogenesis [BR:
they03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JW907_05280
DNA repair and recombination proteins [BR:
they03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JW907_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Sulfatase
Motif
Other DBs
NCBI-ProteinID:
QSF50162
LinkDB
All DBs
Position
1133853..1135304
Genome browser
AA seq
483 aa
AA seq
DB search
MPDADLDLIQAALQQYWGYSELRSPQAEVMTALLQRRDALIVLPTGAGKSLCFQLPAVLQ
GGLTLVISPLLALMENQITELRQRGLAAAAYHSELPSRQRRQILSHLTHYRLLYLSPESL
FSTPLWQCLCAAPIQLNGLIVDEAHCLVQWGDRFRPVYRRLGTVRPALRQCKPLHPRLAI
AAFTATADPNAQRTLIEVLGLEQPVQIIHSPYRANLHLAVRSVWSRGYRRHCLQQFLKQQ
GRTSGLIYARTRRDCETLATWLQEQGYRTTAYHGGLPAAQRRQIESDWLQDKLPFVVCTN
AFGMGVNKPNVRWICHYQPPLQLGEYLQEVGRAGRDGQPAQALALVSDRWGLDREDQQRW
HFFQRQSQDTYNRAMALQTHLPLRGNLPQLRQHFPEVELTLALLHQQGALRWQDPFHYCR
QPLAQVPPPPKDTQEQLMQEFLYHRGCRWQFLLQAFGFATEAGGLRCGHCDRCRPANRTC
KIP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgccgatttagatctcatacaggccgccctacaacaatactggggctattct
gagttgcgatcgcctcaagcagaggtgatgacggcactcttacaacggcgggatgcctta
attgtcctccctaccggagcgggcaaaagtctctgttttcaattgccagcagtgcttcag
ggcggattgacgctggtgatctcgccgctgcttgccctcatggaaaatcagatcactgaa
ttgcggcaacggggtcttgcggcagcggcctatcatagtgaactgcccagccgccaacgc
cgccagattctctcgcacctaacccactaccgcctgctgtatctttcgccagagtcccta
ttttccacccccctttggcagtgcctctgtgcagcaccgattcaactcaatggcttgatt
gtggatgaagcccattgcctcgtacagtggggcgatcgctttcgacccgtttatcgtcgc
ttgggaacggtgcggcctgccctgcgccaatgtaaaccgctgcacccccggctggcgatc
gctgcttttactgctaccgccgatcccaatgcccaacgcaccctcattgaggttttaggt
ctagagcagcctgtgcagatcattcacagcccctatcgtgccaatctccatttagccgta
cgctctgtgtggagtcgggggtatcgccgccattgtctccagcaatttctcaagcagcag
ggcagaacctcaggcttgatctatgcccgcactcgccgcgactgtgaaaccttggccact
tggcttcaggagcaggggtaccgcaccaccgcttaccatggcggactgccggcagcacag
cgacgccaaattgagagcgattggttgcaggataagctaccctttgtggtctgtaccaat
gcctttggtatgggggtgaataaacccaatgtgcgttggatttgccactatcagccaccc
ctgcaactcggtgaatacctccaagaggtgggacgcgctgggcgagacggccaaccagca
caggcactggccttggtgagcgatcgctggggtttagatcgcgaagatcaacagcgttgg
cacttttttcagcgccaaagtcaagatacttacaatcgcgccatggcacttcagacgcat
ctgcccctcaggggtaatcttccgcaactgcgacaacactttcctgaggtggaactgacc
ctagcattactgcatcaacagggggcactccgctggcaagacccttttcactattgccgt
caacccttagcacaggtgccaccgccgcccaaagacactcaagaacagttgatgcaagag
tttctctatcaccgcggctgccgctggcagtttctcctccaagcctttggttttgccact
gaggcagggggattgcgttgtggccattgcgatcgctgtcggcctgcgaaccgtacctgt
aaaataccgtga
DBGET
integrated database retrieval system
