Thermosynechococcus sp. TA-1: JW907_07055
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Entry
JW907_07055 CDS
T10117
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
they Thermosynechococcus sp. TA-1
Pathway
they03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
they00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JW907_07055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
they03400
]
JW907_07055
Enzymes [BR:
they01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JW907_07055
DNA repair and recombination proteins [BR:
they03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JW907_07055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QSF48135
LinkDB
All DBs
Position
1452379..1453092
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AA seq
237 aa
AA seq
DB search
MSEPLQFSLFDTLAPTEAESPPPTPLDAATYDQIPLRAEVPIPAGTYRDLEALAAHCQQC
QRCGLAATRTHVVVSRGNPAAKLMIIGEGPGQAEDETGRPFVGKAGQLLDKILASVNLDS
ERDAYICNIVKCRPPGNRVPEPAETAACLPYLLEQIRLVNPRIILLAGATAVRGLLQDQR
GITKIRGQWIEWQGRWCMPIFHPAYLLRNNSREPGSPKWLTWQDMQAVRDRLRQLDA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccgttgcaatttagcttatttgacaccctcgcccccaccgaggccgaatcc
ccgccaccgacgcctctcgatgctgctacctatgatcaaattccgctgcgcgctgaggtg
cctattcccgccggtacctaccgcgacttggaggcgcttgcggcgcattgtcagcagtgt
caacgctgtggcttagcggccacccgtacccatgtggtggtcagccgtggtaatcccgcc
gccaagctgatgattattggtgaaggaccgggtcaagcggaggatgaaacgggtcgcccc
tttgttggcaaggcagggcagctcctcgataaaattctggcttcggtcaatctcgatagt
gaacgggatgcctatatctgcaacattgtgaagtgccgccctcccggcaatcgcgtccct
gaacccgctgaaacagcagcctgcctgccctatctgttagagcagattcgcttggtcaat
ccccgcattattctactggcgggggcaacggctgtgcgcggcttgctccaagatcagcgg
gggattactaaaattcgtggccagtggattgaatggcaaggacgctggtgtatgccgatt
tttcatccagcgtacctattgcgcaataactcgcgggagccgggcagtcccaagtggcta
acgtggcaggatatgcaagccgtgcgcgatcgcctgcgccaacttgatgcttag
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