Thermosynechococcus sp. TA-1: JW907_07870
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Entry
JW907_07870 CDS
T10117
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
they Thermosynechococcus sp. TA-1
Pathway
they00521
Streptomycin biosynthesis
they00523
Polyketide sugar unit biosynthesis
they00525
Acarbose and validamycin biosynthesis
they00541
Biosynthesis of various nucleotide sugars
they01100
Metabolic pathways
they01110
Biosynthesis of secondary metabolites
they01250
Biosynthesis of nucleotide sugars
Module
they_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
they00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JW907_07870 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JW907_07870 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JW907_07870 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JW907_07870 (rfbB)
00525 Acarbose and validamycin biosynthesis
JW907_07870 (rfbB)
Enzymes [BR:
they01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JW907_07870 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QSF48285
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Position
complement(1613056..1614135)
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AA seq
359 aa
AA seq
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MIKFLVTGGGGFIGANFVRLALTEGWGAVLNLDKVTYACHPGTLAMLEQLPNYQFVKGDV
GDRPLVQELLQTFQPDAVIHFAAESHVDRSINSPQDFIQTNVVGTANLLEEVKTYWQQLP
TGAQEQFRFIHISTDEVYGSLGSEDPPFREDSPYTPNSPYAASKAASDHLVRAYHHTYGL
PTLTTNCSNNYGPYQFPEKLIPLVICQALAGQPLPIYGDGQNVRDWLYVEDHCRAVYTVW
QKGQVGETYNIGGNCEKPNLEVVQTLCDLLQTLVPRADLNYRSLITFVSDRPGHDRRYAI
DACKIQRELGWQPQETFGSGLEKTVQWYLAHQDWVEAARTADYSAWLATHYGSVLSHCP
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtttttggtaacgggtgggggtggttttattggcgccaactttgtgcgctta
gcccttacggaaggctggggggcggtactcaacctcgataaagtgacctatgcctgtcac
cccggcaccttggccatgctcgagcaattgcccaattatcaatttgtcaagggggatgtg
ggcgatcgcccccttgtgcaagagctattgcaaacctttcagcccgatgccgtgattcac
tttgctgccgaaagccatgtcgatcgctccattaatagtccccaagactttatccaaacc
aatgttgtgggcaccgccaatctcctagaggaggtcaaaacctactggcagcagttaccc
actggagcacaggagcagttccgcttcattcatatttccaccgatgaagtctatggcagc
cttggctctgaggatccgccctttcgtgaagacagcccctatacccccaacagcccctat
gccgcctcaaaggctgcctcagatcacttggtgcgagcttaccaccacacctacggtctg
cccaccctgacaacgaattgctccaacaactatggtccctaccagtttcccgaaaagctg
attccgctggtgatctgccaagccctagcggggcaaccgctgccgatatatggcgatggt
caaaatgtgcgggattggctctacgttgaagatcactgccgtgcggtctataccgtttgg
caaaagggtcaggtgggggaaacctacaacattggtggcaactgcgaaaagccgaacctt
gaggtcgtgcaaaccctctgcgatctgctgcaaacccttgtgcctcgcgctgatttgaat
taccgcagcttgattacctttgtcagcgatcgccccggtcacgatcgccgctacgccatt
gacgcctgtaaaattcagcgggaactggggtggcagccccaagaaacgtttggcagtggc
cttgaaaaaaccgtgcagtggtatcttgcccatcaagactgggtggaagcagcgcgcacc
gccgactacagtgcttggctggcaacccactatggcagcgttcttagtcattgcccatga
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