Thermosynechococcus sp. TA-1: JW907_09160
Help
Entry
JW907_09160 CDS
T10117
Name
(GenBank) trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
they Thermosynechococcus sp. TA-1
Pathway
they03030
DNA replication
they03430
Mismatch repair
they03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
they00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JW907_09160
03430 Mismatch repair
JW907_09160
03440 Homologous recombination
JW907_09160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
they03032
]
JW907_09160
03400 DNA repair and recombination proteins [BR:
they03400
]
JW907_09160
Enzymes [BR:
they01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JW907_09160
DNA replication proteins [BR:
they03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JW907_09160
DNA repair and recombination proteins [BR:
they03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JW907_09160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
Nitr_red_bet_C
Motif
Other DBs
NCBI-ProteinID:
QSF48515
LinkDB
All DBs
Position
1860755..1862113
Genome browser
AA seq
452 aa
AA seq
DB search
MKIVRRRLVGWQPVYDIGLAGDHNFLLANGAIAANCFNKSHSTAYGYVTYQTAFLKANFP
VEYMAALLTANSGDQDKVQRYIATCLSMGIEVLPPDVNRSDIDFTPVGDKILFGLSAVRN
VGQGVIEAILQARAEGGAFQSLADFCERVPRAGGDSRILNRRALESLIACGAMDSLHPQR
NRNQLMQDLPLVLEWAQARAKDRAVGQVNLFDMLAGGSSNESGGSYDPAPSAPPVDDLPD
AEKLRQEKDLLGFYVSNHPLKDIHRPAAMIAPISLADLEQHTGQGIVSVIALLTGLKPIT
TKRGERMAIVQLEDLTGQAEAVVFPKAYERIHGQLQLDHRLLLWGTLEMRDDRPQLLIED
AEPLEAVKLVLVDLPVEQAGDIQAQSRLSEVLKQQVGDMPKVPVVVKVTDGYHAQYVRLG
SQFRVEDADRARHALASAGFQAEASELLSLKL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattgtccgccggcggctagtgggttggcaaccggtctatgacattggtttagct
ggggatcacaattttctcttggccaatggagcgatcgccgccaattgctttaacaagtcc
cactccacggcctacggctatgtgacctatcaaaccgcctttctcaaggccaactttccc
gtcgagtacatggccgccttgctcacggcgaatagtggcgaccaagacaaggtacagcgc
tatattgccacctgcctcagcatggggattgaggttcttccccccgatgtgaatcgctcg
gatattgactttacgcccgtgggggacaaaattctttttggtctgtcggccgtacgcaat
gttggtcagggagtgattgaggccattttgcaggcacgggcagaggggggtgcctttcaa
agtttggcggatttttgcgaacgggttccgcgtgcggggggcgatagtcgcattctcaac
cgtcgtgcccttgaatccctgattgcctgtggtgccatggatagtctgcatccgcagcgc
aaccgcaaccaactgatgcaggatctccccctcgtgctggagtgggcacaggcgcgcgcc
aaggatcgggcggtggggcaagtcaacctctttgatatgttggcgggtggctccagcaat
gaatccggcggtagctatgacccagcccccagtgcgcccccagtggacgacctaccggat
gccgaaaagctccgccaagaaaaagacctactgggattttatgtgtcgaaccatcccctc
aaggatattcatcggccagcggccatgattgcccctattagcttggcggatctcgagcag
cacacaggtcaagggatagtgagtgtcattgccctgctcacaggactcaagcccattacc
actaagcgcggcgagcggatggccattgtgcagttggaagacctcacgggtcaagcggaa
gctgtcgtctttcccaaagcctacgagcgcattcatgggcagttacagcttgatcatcgg
ctactgctgtggggcaccctagagatgcgcgacgatcgcccccaactcctgattgaagat
gccgaaccccttgaagcggtgaagctggtgcttgtggatttgcctgttgagcaagcgggg
gacattcaagcccaaagtcgcctctcggaagtgctcaaacaacaggtgggcgacatgccc
aaggtgccggtagtggtcaaagtgaccgatggctaccatgcccagtacgtacgcctagga
tcacagtttcgcgttgaagatgccgatcgcgcacgccatgcccttgctagtgccggtttt
caggctgaagcgagtgaactgttgagtctcaagctctag
DBGET
integrated database retrieval system
