Thermosynechococcus sp. TA-1: JW907_10400
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Entry
JW907_10400 CDS
T10117
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
they Thermosynechococcus sp. TA-1
Pathway
they03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
they00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JW907_10400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
they03400
]
JW907_10400
DNA repair and recombination proteins [BR:
they03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JW907_10400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
AAA_23
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
QSF48742
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Position
complement(2109129..2111519)
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AA seq
796 aa
AA seq
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MVVLTSQVSALDKSLGRLGWPRLCQQLATFAATKRGMRQLQGGEILGGTQAASQVLLAQT
TEVITLETVHQVHLDFSQVTDIEPALARLDRQGCLQGMELLAIAHLLSAARQQRRQIEEH
AQLNELQQLVAGVRTYPEMTQEIYRCITDQGQVSDRASPELAEIRQQQRQCRAQIQQQLQ
QILQQRASAIQEAVVTQRRDRYVLAVKATHKDQMPGIVHDLSASGATLYIEPQETIDLQN
RLQQLTHQEAEAERTICQALSDQLATISDDLWYLLDVLTTLDMAVARAHYSLWLQGNPPQ
FVSDTRLHLKALRHPLLVWQEHHEQGQTVVPIDIELPPPTKVVTITGPNTGGKTATLKAL
GLAALMAKAGLYVPAAAPIELPWFTGIWADIGDEQSLTQNLSTFSSHICNIRDILTELEM
TGGNTLVLLDEVGAGTDPSEGTALAIALLRYLADHASLTFATTHYGELKALKYQDSRFEN
AAVEFDETTLAPTYRLLWGIPGQSNALAIAQRLGLHPSIVEGAKAFLSGDSNSVNEMISG
LVAQRQVQESKTTAAATLLRDTEALYQEIATKAQELRQRQQQLRQQQEEQVRTALHQAQQ
EIAKVIAQLQRANSPEQVQAAQTALHQIEKTYLPPPPPVGFIPQPGDRVRLPQWQQVGEV
LSVSQQGDIVVQVGSVKLTVPPHAVESLKGEPVRTPSKPKSDPAQAPPPPPSRTPTPAIR
TESRTLDLRGKRTHEAEPLLEEFLNRQQGTVWIIHGHGSGALRQFVHQFLDQHPSVQSYH
LAPPEEGGRGVTIVQL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
ttggttgttctcacgtcacaagttagtgcactagacaaatccctagggcggttggggtgg
ccgcgtctctgtcagcagttggcaacgtttgctgctaccaaacgggggatgcgccagctg
caggggggagagattctagggggcacccaagcagccagtcaagtgctgttggctcaaacc
actgaggtgattacccttgaaacggtgcaccaagtgcacctcgattttagccaagtcaca
gatattgaaccggcgctggcgcggctggatcgccaaggctgtttgcagggaatggagcta
ctggcgatcgcccacctgttgagtgcggcgcggcaacagcggcgtcaaattgaggaacac
gcgcaactcaatgaactccaacaactagtggctggtgtccgtacctatcctgagatgact
caggagatttaccgctgtattaccgatcaggggcaagtgagcgatcgcgccagtccagaa
ttggctgagattcgccagcagcaacggcagtgccgtgcccagatccagcagcaactgcag
cagattctgcagcagcgagccagtgccattcaagaggcggtggtcacccaacggcgcgat
cgctatgtgttggcagtcaaagccacccacaaagaccagatgccgggaattgtccacgat
ctctccgccagtggtgccacgctctacattgagccgcaagaaaccattgacctgcaaaac
cgcctgcaacaacttacccatcaagaggctgaggccgaacgcaccatttgccaagccctc
tcggatcagttggccacgattagtgatgatttgtggtatctgctcgatgtgctgaccacc
ctcgatatggcggtcgcccgtgcccactatagtctctggttgcagggcaatcccccgcag
tttgtcagtgacacgcggctgcacctgaaggcgttgcggcatcccctcttggtgtggcaa
gagcaccatgagcaaggacagaccgtggtgcccattgacattgaattgcccccccccacc
aaggtagtgacaatcactggccccaacaccggcggcaaaacagcaaccttgaaggccttg
ggcttggcagcactgatggcaaaagcagggttgtatgtgccagcggcagcgcccatagag
ttgccttggtttacagggatttgggcagacattggggatgagcagtccctgacccaaaac
ctgtccaccttttccagtcatatctgcaatatccgcgatattctcaccgagctcgagatg
acagggggcaatacgttggtgctcctcgatgaagtgggggccggcacggatcccagtgag
ggtacagccctagcgatcgccctgttgcgctatctggcagaccacgccagtctcaccttt
gccaccacccactatggcgaactcaaagccctcaagtatcaggacagccgctttgaaaat
gccgccgttgagtttgatgagaccacccttgccccgacctatcggctgctgtggggcatt
ccgggacagtctaatgccctagcgatcgcccagcggttggggctacatcccagtattgtt
gaaggtgccaaggcctttttaagcggtgacagcaacagtgtcaacgagatgattagcggg
ctagtggcacaacgccaagtgcaggagtcgaaaaccaccgctgcggcaaccctgcttcgc
gatacagaagccctctaccaagaaattgccaccaaggctcaagaactgcggcaacgacag
cagcaactgcgccaacaacaggaggagcaggtacgcaccgccctccatcaggctcagcag
gaaattgccaaagtcattgctcaactgcaacgcgccaacagtcccgaacaggtacaagct
gcccaaacggcgctgcatcagattgagaaaacttacttaccaccacctccgcccgttggc
tttattcctcaaccaggcgatcgcgttcgcttgccccaatggcaacaggtgggcgaagtc
ctcagtgtcagccagcagggggatattgtcgtccaagtgggttccgtgaaattgactgtg
cccccccacgccgtagagtctctcaagggcgaaccggtacgcacaccatctaaacccaag
tccgacccagctcaagctccccccccacccccttctcgcaccccaacacccgccattcgc
acagagagccgtaccctcgatctgcggggcaagcgcacccatgaggcggaacccctccta
gaggaatttctcaaccgccagcagggaacggtttggattatccacggccacggcagtggt
gccctccgccagtttgtgcatcaatttttagatcagcaccccagcgttcaaagctatcac
cttgcgcctcctgaagagggtggccggggagtaaccattgtgcagttatag
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