Thermosynechococcus sp. TA-1: JW907_10475
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Entry
JW907_10475 CDS
T10117
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
they Thermosynechococcus sp. TA-1
Pathway
they03420
Nucleotide excision repair
they03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
they00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JW907_10475 (pcrA)
03430 Mismatch repair
JW907_10475 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
they03400
]
JW907_10475 (pcrA)
Enzymes [BR:
they01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JW907_10475 (pcrA)
DNA repair and recombination proteins [BR:
they03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JW907_10475 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
JW907_10475 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
ResIII
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
DEAD
AAA_22
FlgN
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
QSF48755
LinkDB
All DBs
Position
complement(2123865..2126186)
Genome browser
AA seq
773 aa
AA seq
DB search
MSRDFLAGLNPSQRQAVEHYCGPMLVVAGAGSGKTRTLTYRIAHLIRQHQVAPENILAVT
FTNKAAREMKERIEALFGQEVAQQLYGRDWLDLSPLEQQRVRSRVYQTYTKPLWIGTFHS
LCARLLRLEIEAYQHPQGYRWTRHFTIFDESDVQSLIKEIATAELNLDERQHDPRGIRYK
ISHAKNRGLSPDQLEQEQRSPAGRVAAEVYRRYEATLAQNNALDFDDLILRTVQLLQQHP
ERLEYWHQQFQHILVDEYQDTNRTQYDLIRLLATNGTPPQQFQNWGDRSIFVVGDVDQSI
YSFRCADFTILMNFQQDFGDRLPDDDSRTMIKLEENYRSVANILQAANHLIEHNNERIAK
VLRPTKGEGAPIYCECCHTETDEASFVVQTIKALGSQSLEPQWGRFAILYRTNAQSRPFE
EALVRANIPYTVVGGLKFYERKEVKDVLAYLRLLQNPQDTVSLRRIINVPRRGIGKTSLD
RLSDAAQTLGISLWDLIADTESMTPLAGRASRAVQQFVTLMTRLRSLVDDIELPELVKTV
IEETGYRRELENEDTKESLERLQNLMELVNAAQQFSEENEGASLSDFLNSSALASDLDTL
QEGEGGVSLMTLHAAKGLEFPVVFLVGMEQGLFPNFRSLNDPMALEEERRLCYVGITRAQ
EQLFLTFAQSRRRYGGSEDTIPSQFLTELPPELLTGNVQRRPKMAAVTKLSPARLSKAAA
SGWRVGDRILHPVYGEGEITHVFDTGPKLSLAIRFPRRGQKVVDPRLTPLERL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagtagggattttctcgcaggactgaatccatcacaacggcaggcggtggagcactat
tgtggcccgatgttggtggtggcaggcgccggttccgggaaaactcgcacgctcacctat
cgcattgcccatttgattcgccagcatcaggtggcaccagaaaatatcttggcggtgacg
tttacaaataaggccgcccgcgaaatgaaggagcggattgaagctctctttggtcaagag
gtggctcagcaactctacgggcgggactggctggatctctctcctctcgaacaacagcgg
gtgcgatcgcgagtctatcaaacgtacacgaagcccctttggattggcacgttccacagc
ctgtgtgcccgactcctgcgcttggaaatagaggcctatcaacatccccaagggtatcgc
tggacgcggcatttcaccatttttgatgagtcagatgtgcaaagtttgattaaggaaatt
gccactgcggaactcaatctcgatgagcgccagcatgatccgcgcggtatccgctacaaa
attagccatgccaaaaaccgagggctaagccccgatcaattggagcaggaacagcgatcg
cccgctggccgggtggccgccgaggtttatcgtcgctatgaggcaacccttgcccagaat
aacgcccttgactttgatgatttgattttgcgaacggtgcagctgctacaacagcacccc
gagcgccttgagtattggcatcagcaattccaacatattctggtggatgagtaccaagac
accaaccgcacccaatacgatctcattcggctattggccaccaatggtacgccaccgcaa
cagtttcagaattggggcgatcgctcgatttttgtcgtcggcgatgtcgatcagtccatt
tattcctttcgctgcgctgatttcactatcctgatgaatttccagcaggattttggcgat
cgcctgcccgatgacgatagccgcacaatgatcaagctagaggaaaactatcgctccgtt
gccaacattttgcaggccgccaatcatctcattgagcacaacaacgaacgcattgctaaa
gtgctgcgtcccaccaaaggagaaggcgctcccatttactgcgagtgttgccacactgaa
accgatgaagcctcttttgttgtccaaaccatcaaagccttgggcagtcaatccctcgaa
ccccaatggggacggtttgccattctctaccgcaccaacgcccaatcgcgcccctttgag
gaggccttagttcgcgccaacattccctacaccgtggttggtggtctcaaattctatgag
cgcaaggaagtcaaggatgttctcgcttatttgcggctgctgcaaaacccccaagacacc
gtgagtctgcggcgaattattaacgtgccacgacgcggcattggcaaaaccagtttggat
cgcctcagtgacgccgcgcaaacccttggcatttccctatgggatttaattgccgatacc
gaatccatgacgcccttggccgggcgagccagtcgtgccgtgcagcagtttgtgaccctc
atgacccgcctgcgatcgctagtggacgacattgaattgcctgaactggtgaaaaccgtg
attgaagagacaggctaccgccgcgaactcgaaaacgaagacactaaggaaagcctagag
cgactgcaaaacctaatggaattggttaacgctgcccagcaatttagcgaagaaaacgag
ggggcaagcctcagcgattttctcaacagttctgcccttgcctcggatttggataccttg
caggagggagagggcggcgtttccctgatgaccttgcatgccgctaaggggctagaattt
cccgttgtctttttggtgggcatggagcagggactctttcccaacttccgcagtctcaac
gaccccatggcccttgaagaagaacgccgcctttgctatgtcggcatcacccgtgcccaa
gaacaactctttctcacctttgcccaaagccgtcgccgctacggtggcagtgaagatacg
attccttcgcaatttttgacagagctacccccagaactgctgacagggaatgttcaacga
cgacccaaaatggctgctgtcacgaagctatcccccgcacggttgagcaaggctgctgcc
tctggttggcgggtgggcgatcgcattctccatcctgtctatggcgaaggggaaattacc
catgtctttgatactggcccgaagctctccttggcgattcgtttcccacgtcgcgggcaa
aaggtggtggatccccgcctgacaccccttgagcggctataa
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