Thermosynechococcus sp. TA-1: JW907_12620
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Entry
JW907_12620 CDS
T10117
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
they Thermosynechococcus sp. TA-1
Pathway
they03030
DNA replication
they03430
Mismatch repair
they03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
they00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JW907_12620
03430 Mismatch repair
JW907_12620
03440 Homologous recombination
JW907_12620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
they03032
]
JW907_12620
03400 DNA repair and recombination proteins [BR:
they03400
]
JW907_12620
Enzymes [BR:
they01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JW907_12620
DNA replication proteins [BR:
they03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JW907_12620
DNA repair and recombination proteins [BR:
they03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JW907_12620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
DnaA_N-like_STI
AAA_22
RuvB_N
AAA_30
DNA_pol3_delta_C
AAA_19
TIP49
RCF1-5-like_lid
AAA_5
Rad17
AAA_18
AAA_16
AAA_lid_RFC1
DUF815
Motif
Other DBs
NCBI-ProteinID:
QSF49146
LinkDB
All DBs
Position
2568524..2570329
Genome browser
AA seq
601 aa
AA seq
DB search
MTYEPLHHKYRPQRFADLVGQGAIATTLTQALLKERIAPAYLFCGPRGTGKTSSARILAK
SLNCLRSAKPTPDPCGQCEVCRQVANGNSLDVIEIDAASHTGVDNIRELIEKAQFAPVQC
RYKVYVIDECHMLSVSAFNALLKTLEEPPPHVVFVLATTDPQRVLPTIISRCQRFDFRRI
PLGEMVAHLQHIADKEQIDIEPQALTLVAQLSQGGLRDAESLLDQLSLYPERITVEHVWQ
LAGAVPEQDLRQLLGAIARRDAVAVLEHTRQLLERGRDPLTILQNLASLYRDLLLAKTVP
ERQDLVALTAETWQALIAVAEGWSVEEILHAQQHLRTCESQIKQSSQPRLWLEISILGLM
TETAPQSSVPNVAPTAIPKLTIVSPPQPDLPAIAAPPKESESPVKHIQIKDTKDTVAPAP
EPKPTPEPRADHTEPVWEQALQVLQQMQMSTYALLSQHGHLRQMSDREVHIGIVNQTLLN
LTKNNQAKIEAAFAQVLGRRIKVAFEIAPLPHKTTPAPKAKEPPHSAVVVPFQPREEPPP
PPIEPTSTPPPPPLTTTPDPVRESAEKLARFFNGVVIRLPDEGESPDTPIAEASEEDELE
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgacctacgaacccctgcatcacaaatatcgtccccaacgctttgcagatctagtgggt
caaggggcgatcgccaccacgcttacccaagccctactcaaggagcgcattgcccctgcc
tatcttttttgtggtcctcgcggcacgggtaaaacctctagtgcccgtattttggctaag
tccctcaactgcctgaggagtgccaagcctacccccgatccctgtggccagtgtgaagtc
tgccgtcaggtggccaacggcaacagcttagatgtgattgaaattgatgctgccagccac
acgggggtggacaatatccgcgaactgattgagaaggcacaatttgccccagtacagtgt
cgctacaaagtttatgtgattgacgaatgccacatgctcagtgtgtcggccttcaatgcc
ctcctcaaaaccctagaggagccgccgccccatgtggtctttgtccttgccaccacagat
ccgcagcgagtcttgccaacaattatttcccgctgtcagcggtttgattttcggcggatt
cccctaggggagatggttgcccaccttcagcacattgccgataaggagcaaattgacatt
gagccgcaggccttgaccctggtggcgcaattgtcccaagggggactgcgggatgctgaa
agcttgctggatcagttgagcttatatcctgaacggatcaccgtagaacatgtatggcaa
ctggctggggcagtaccagaacaggatctgcggcaattgctgggggcgatcgcccgtcgg
gatgcggtggcggttcttgagcacacccgccaattactagaacggggtcgcgatccgctg
acaattctgcaaaatctggccagtctctaccgtgatttgctcttggcgaaaaccgtccct
gaacggcaggacttggtagccctgacagcagaaacttggcaggctttgattgccgttgct
gagggatggtccgttgaggagattctgcatgcccaacaacatctgcgcacctgtgaaagc
caaatcaaacagagcagtcaaccccgtctctggctggaaattagcattctggggttgatg
acggaaacggcaccccaatccagtgtgcccaatgtagcgcctactgccattccgaagctc
acgattgtctcgccccctcagcctgacctcccagcgattgcggcaccccccaaggagtca
gagtcaccagtcaaacatattcaaattaaagacacgaaagacacggttgctccagctcct
gaacccaagccaacccctgaaccgcgggcagatcataccgaacctgtgtgggaacaggca
ctacaggtcttgcagcagatgcaaatgagcacctatgctctgctctcgcagcatggtcat
ctgcgacaaatgagcgatcgcgaggtgcacatcggcattgttaatcaaactttgttaaat
ctgacaaagaataaccaagccaaaattgaagccgcctttgcccaagttctaggccgccgc
atcaaagtcgcctttgagattgcccccctaccccacaaaaccacgcctgcgccaaaagcc
aaggagccgccgcactccgctgtcgtcgttccctttcagccacgggaagagccaccgcca
ccccccatagaaccaacctctactccacccccgccccctctcaccactaccccggatcct
gtgcgtgaatctgccgaaaaactggcacgattctttaacggggtggttattcgcttaccc
gatgagggagaaagtccagacaccccaattgctgaagcctctgaggaggatgagcttgag
ttttaa
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