Thermosynechococcus sp. TA-1: JW907_13000
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Entry
JW907_13000 CDS
T10117
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
they Thermosynechococcus sp. TA-1
Pathway
they03018
RNA degradation
Brite
Enzymes [BR:
they01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
JW907_13000
Messenger RNA biogenesis [BR:
they03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JW907_13000
Ribosome biogenesis [BR:
they03009
]
Prokaryotic type
rRNA processing factors
JW907_13000
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QSF49215
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Position
2653038..2655026
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AA seq
662 aa
AA seq
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MPKQIIIAEEHRLAAVFAEDQIQELIVATGTHQVGDIYLGVVENVLPGIDAAFVNLGDAS
RNGFIHVTDLGPLRLKRTAGAITELLAPQQKVLVQVMKEPTGTKGPRLTGNISLPGRYLV
LMPYGRGVNLSRRITNEAERHRLRALGILVKPAGMGLLVRTEAEGVSEEAILEDLELLQR
QWETIQQQAASSRPPQLLGRDDDFIQKVLRDVYSSDVNRIVVDTPDGVKRVKQHLKNWNV
NKPVGVLIDYHQEPIPILDYFRVNAAIREALKPRVDLPSGGYIIIQPTEALTVIDVNSGS
FTSSATSRETVLWTNCEAATEIARQLRLRNIAGVIIVDFIDMDSRRDQLQLLEHFSKALR
ADKARPQIAQLSELGLVELTRKRQGQNIYELFGRPCSACGGLGHLVHLPGEPEDSPGEIV
ERSPMPRPPEPRRSLESRTEPNGFASSSLETQLINHPDYQAVGGIRPRASRSSHPPTPRS
PRRASENGNGRKVITTPTETVPPPVVKVESRPLRPARPSRSEPAEVITVTMTDQEQAVYA
EMGISPLVLHSEEVKNPRGTIVMVARPGQDPLPLPQKTARPVSEGMPEDIPETADEPPAP
VVSTINVEPIPATALLNTSEPEVTTESESGGEASTPEASVPAGRRRRRRVTTSEQLSLDA
NT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcaaattattattgccgaggaacatcggctagcggcggtctttgccgaagat
caaattcaagaattaatcgtggccacgggcacccatcaggtgggggacatctaccttggg
gtggttgaaaatgtcctgccgggcattgatgctgcctttgtcaacttgggggatgcctcc
cgtaatggctttatccatgtcactgaccttggcccattgcgcctgaagcgaacggctggg
gcaatcacggaattgctcgcaccgcagcaaaaagtgctggttcaggtcatgaaggaaccc
acgggcaccaaggggccacggctgaccggaaatatttcgttgcctgggcgctatctcgtg
ctgatgccctatggtcggggggtgaatctatcgcgacggattaccaatgaggcggaacgg
catcggctacgtgccttgggcattttggtcaaacccgctggcatggggctactggtgcgt
acagaggctgagggtgtctccgaagaggccatacttgaggatctggaactcctgcaacgg
cagtgggaaacgatccaacagcaggcggcctccagccgtcctccccagcttctggggcgc
gatgatgactttatccaaaaagtgttgcgggatgtctatagcagtgatgtcaaccgcatt
gtggtggatactccggatggggtcaaacgggtcaaacagcacctgaaaaactggaatgtc
aataagccggtgggggttctcattgactatcaccaagaacccattcccattttggattac
tttcgggtgaatgctgccatccgtgaagccctgaaaccccgtgtggatttgccctccggt
ggctatatcatcattcaaccaacagaggcactgacggtcattgatgtgaactctggttca
ttcactagttcagccacctcgcgggaaacagtgctgtggacgaactgcgaagcggctacg
gagattgctcgccaactgcgactgcgcaatattgctggcgtgatcattgtggattttatt
gacatggattcccgccgcgaccagttgcaactgctggagcactttagtaaagccctgcgt
gctgataaagctcgcccccaaattgctcaactctcagaactggggctggtggaactgacc
cgcaaacgtcaagggcaaaatatctatgaactttttggccgtccctgtagtgcctgcggt
ggcttgggtcacttggtgcatttacccggtgaaccggaggatagccccggcgaaattgtc
gagcgatcgcccatgccgcgtccaccggagccacgccgcagtttagaatcccgcactgaa
cccaatggctttgccagtagcagtctagagacccaactcattaaccaccctgactatcaa
gcggtagggggtattcgcccccgtgcttcccgcagtagtcatccaccaaccccccgcagt
cctcgtcgtgcctctgaaaatggcaatggtcgcaaggtgattaccacgcctacagaaacg
gtgccgccgccagtggtcaaagtggagagccgtccgctgcgccctgcccgtcctagccgc
tctgaaccagcggaagtgattaccgtaacaatgacggatcaagagcaggcggtctatgcg
gaaatgggaatttcaccccttgtgttgcactctgaggaggtgaagaatccgcggggaacg
attgtgatggtggcacgccccggccaagaccccctacccctgccccagaaaactgcacga
cccgttagtgagggaatgcctgaggatatcccagagactgctgatgagccgcccgcccct
gtggttagcacgattaatgtcgagccgattccagccactgcgctgctcaataccagtgag
ccagaagtcacgaccgagtctgaatccggtggggaagcatccaccccagaggcctccgtg
cccgcaggtcggcggcggcggcgacgggtcaccactagcgagcagctctccctcgatgcc
aatacttag
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